| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68360 |
|---|
| Symbol | |
|---|
| ID | 4384395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 6098345 |
|---|
| End bp | 6100249 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639328111 |
|---|
| Product | putative beta-ketoacyl synthase |
|---|
| Protein accession | YP_793645 |
|---|
| Protein GI | 116053321 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0546229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.450942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAC TACCGGTCAT TGTTGGTTTC GGTGGCTACA ACGCAGCAGG CCGTAGTTCC
TTCCACCACG GCTTCCGTCG CATGGTCATC GAATCGATGG ACCCGCAGGC GCGCCAGGAA
ACCCTAGCCG GCCTGGCGGT CATGATGAAA CTGGTCAAGG CCGAAGGCGG CCGCTACCTG
GCCGAAGACG GCACGCCGCT GTCCCCGGAG GACATCGAGC GGCGCTACGC CGAACGCATC
TTCGCCTCTA CCCTGGTGCG ACGCATCGAA CCGCGGTACC TCGACCCGGA TGCCGTCCAC
TGGCACAAGG TCCTCGAGCT GTCCCCTGCC GAAGGCCAGG CGCTGACCTT CAAGGCCTCG
CCCAAGCAAC TGCCCGAGCC GCTGCCGGCC AACTGGTCGA TCGCTCCCGC GGAGGATGGC
GAGGTACTGG TGAGCATCCA CGAGCGCTGC GAGTTCAAGG TCGACAGCTA CCGTGCGCTG
ACGGTGAAGT CCGCTGGCCA GCTGCCCACC GGTTTCGAAC CGGGCGAGCT GTACAACTCG
CGCTTCCACC CGCGCGGCCT GCAGATGTCG GTGGTCGCCG CGACCGACGC GATCCGCTCC
ACCGGCATCG ACTGGAAGAC CATCGTCGAC AACGTCCAGC CCGACGAGAT CGCGGTGTTC
TCCGGCAGCA TCATGAGCCA GCTCGACGAC AACGGTTTCG GCGGCCTGAT GCAATCCCGC
CTGAAGGGCC ACCGGGTCTC GGCCAAGCAA CTGCCGCTGG GCTTCAACAG CATGCCCACC
GATTTCATCA ATGCCTACGT GCTCGGCAGC GTCGGCATGA CCGGCAGCAT CACAGGCGCC
TGCGCCACCT TCCTCTACAA CCTGCAGAAG GGTATCGACG TCATCACCAG CGGCCAGGCC
CGGGTGGTCA TCGTCGGCAA CAGCGAGGCG CCGATCCTGC CGGAGTGCAT CGAGGGCTAC
AGCGCCATGG GCGCACTGGC CACCGAAGAA GGCCTGCGCC TGATCGAAGG CCGCGACGAC
GTGGACTTCC GCCGCGCCAG CCGGCCGTTC GGCGAGAACT GCGGCTTCAC CCTGGCCGAG
TCCAGCCAGT ACGTAGTGCT GATGGACGAC GAACTGGCCC TGCGCCTGGG CGCGGATATC
CACGGCGCGG TAACCGACGT GTTCATCAAC GCCGACGGTT TCAAGAAGTC CATCTCCGCC
CCCGGCCCGG GCAACTACCT GACGGTAGCC AAGGCGGTGG CCAGCGCGGT GCAGATCGTC
GGCCTGGACA CCGTGCGCCA CGCCAGCTTC GTCCACGCCC ACGGCTCCAG CACGCCGGCC
AACCGGGTCA CCGAATCGGA AATCCTCGAC CGCGTGGCCA GCGCCTTCGG CATCGACGGC
TGGCCGGTCA CCGCGGTGAA GGCCTACGTC GGCCACTCCC TGGCCACCGC CAGCGCCGAC
CAGCTGATCT CCGCCCTAGG CACGTTCAAG TACGGCATCC TCCCTGGGAT CAAGACCATC
GACAAGGTCG CCGACGACGT CCACCAGCAG CGCCTGAGCA TCTCCAATCG CGACATGCGC
CAGGACAAGC CGCTGGAGGT ATGCTTCATC AACTCCAAGG GCTTCGGCGG CAACAACGCC
AGCGGCGTGG TGCTGTCGCC GCGAATCGCC GAGAAGATGC TGCGCAAGCG CCATGGCCAA
GCGGCCTTCG CCGCCTACGT CGAGAAGCGC GAGCAGACCC GCGCCGCCGC CCGCGCCTAC
GACCAGCGCG CGCTGCGGGG CGACCTGGAG ATCATCTACA ACTTCGGCCA GGACCTGATC
GACGAGCACG CCATCGAGGT CAGCGCCGAA CAGGTGACGG TGCCCGGCTT CAGCCAGCCG
CTGGTATACA AGAAGGACGC GCGTTTCAGC GACATGCTCG ACTGA
|
|---|
| Protein sequence | MSRLPVIVGF GGYNAAGRSS FHHGFRRMVI ESMDPQARQE TLAGLAVMMK LVKAEGGRYL
AEDGTPLSPE DIERRYAERI FASTLVRRIE PRYLDPDAVH WHKVLELSPA EGQALTFKAS
PKQLPEPLPA NWSIAPAEDG EVLVSIHERC EFKVDSYRAL TVKSAGQLPT GFEPGELYNS
RFHPRGLQMS VVAATDAIRS TGIDWKTIVD NVQPDEIAVF SGSIMSQLDD NGFGGLMQSR
LKGHRVSAKQ LPLGFNSMPT DFINAYVLGS VGMTGSITGA CATFLYNLQK GIDVITSGQA
RVVIVGNSEA PILPECIEGY SAMGALATEE GLRLIEGRDD VDFRRASRPF GENCGFTLAE
SSQYVVLMDD ELALRLGADI HGAVTDVFIN ADGFKKSISA PGPGNYLTVA KAVASAVQIV
GLDTVRHASF VHAHGSSTPA NRVTESEILD RVASAFGIDG WPVTAVKAYV GHSLATASAD
QLISALGTFK YGILPGIKTI DKVADDVHQQ RLSISNRDMR QDKPLEVCFI NSKGFGGNNA
SGVVLSPRIA EKMLRKRHGQ AAFAAYVEKR EQTRAAARAY DQRALRGDLE IIYNFGQDLI
DEHAIEVSAE QVTVPGFSQP LVYKKDARFS DMLD
|
|---|
| |