Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68080 |
Symbol | |
ID | 4383468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6074299 |
End bp | 6074994 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328090 |
Product | ABC transporter permease |
Protein accession | YP_793625 |
Protein GI | 116053301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.382503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0204508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCG ACCTGCATGG GTTCGGCGAG CAACTGCTCG CCGGTACCTG GATGACCCTC AAGCTGTCGC TGGCGGCGGT CTGCGTGGGG CTGTTGCTCG GCCTCCTCGG CGCCATCGCG AAGACTTCGA AGTACGCGGC CCTGCGCTTC CTCGGCGGCA CCTACACCAC CATCGTCCGT GGCGTGCCGG AAACGCTCTG GGTACTGATG ATCTATTTCG GCACGGTGAG CGGCCTGAAC GCCCTCGGCG ACCTTTTCGG CAAGCCGGAC CTGGCACTCT CGCCGTTCGC CGCCGGCACC CTGGCCCTCG GCCTGTGCTT CGGCGCCTAC GCCACCGAGG TGTTCCGCGG CGCGCTGTTG TCCATTCCGC GCGGCCATCG CGAGGCCGGC CAGGCGCTCG GCCTGTCGCC CGGACGGATC TTCTGGCGCA TCGTCCTGCC GCAGATCTGG CGGGTCGCCC TGCCCGGCCT CGGCAACCTG TACCTGATCC TGCTGAAGGA CACCGCGCTG GTGTCGCTGA TCACCCTCGA CGAGATCATG CGCAAGGCGC AGGTCGCCTC CAACGCGACC AAGGAACCCT TCACCTTCTA CATGACCGCG GCCGCCATCT ACCTGAGCCT CACGGTCGTC ATCATGGTCG CCCTGCACTT CCTCGAACGT CGCGCCGGCC GTGGTTTCGT GAGGAACGAG CTATGA
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Protein sequence | MILDLHGFGE QLLAGTWMTL KLSLAAVCVG LLLGLLGAIA KTSKYAALRF LGGTYTTIVR GVPETLWVLM IYFGTVSGLN ALGDLFGKPD LALSPFAAGT LALGLCFGAY ATEVFRGALL SIPRGHREAG QALGLSPGRI FWRIVLPQIW RVALPGLGNL YLILLKDTAL VSLITLDEIM RKAQVASNAT KEPFTFYMTA AAIYLSLTVV IMVALHFLER RAGRGFVRNE L
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