Gene PA14_68080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_68080 
Symbol 
ID4383468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6074299 
End bp6074994 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID639328090 
ProductABC transporter permease 
Protein accessionYP_793625 
Protein GI116053301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.382503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0204508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG ACCTGCATGG GTTCGGCGAG CAACTGCTCG CCGGTACCTG GATGACCCTC 
AAGCTGTCGC TGGCGGCGGT CTGCGTGGGG CTGTTGCTCG GCCTCCTCGG CGCCATCGCG
AAGACTTCGA AGTACGCGGC CCTGCGCTTC CTCGGCGGCA CCTACACCAC CATCGTCCGT
GGCGTGCCGG AAACGCTCTG GGTACTGATG ATCTATTTCG GCACGGTGAG CGGCCTGAAC
GCCCTCGGCG ACCTTTTCGG CAAGCCGGAC CTGGCACTCT CGCCGTTCGC CGCCGGCACC
CTGGCCCTCG GCCTGTGCTT CGGCGCCTAC GCCACCGAGG TGTTCCGCGG CGCGCTGTTG
TCCATTCCGC GCGGCCATCG CGAGGCCGGC CAGGCGCTCG GCCTGTCGCC CGGACGGATC
TTCTGGCGCA TCGTCCTGCC GCAGATCTGG CGGGTCGCCC TGCCCGGCCT CGGCAACCTG
TACCTGATCC TGCTGAAGGA CACCGCGCTG GTGTCGCTGA TCACCCTCGA CGAGATCATG
CGCAAGGCGC AGGTCGCCTC CAACGCGACC AAGGAACCCT TCACCTTCTA CATGACCGCG
GCCGCCATCT ACCTGAGCCT CACGGTCGTC ATCATGGTCG CCCTGCACTT CCTCGAACGT
CGCGCCGGCC GTGGTTTCGT GAGGAACGAG CTATGA
 
Protein sequence
MILDLHGFGE QLLAGTWMTL KLSLAAVCVG LLLGLLGAIA KTSKYAALRF LGGTYTTIVR 
GVPETLWVLM IYFGTVSGLN ALGDLFGKPD LALSPFAAGT LALGLCFGAY ATEVFRGALL
SIPRGHREAG QALGLSPGRI FWRIVLPQIW RVALPGLGNL YLILLKDTAL VSLITLDEIM
RKAQVASNAT KEPFTFYMTA AAIYLSLTVV IMVALHFLER RAGRGFVRNE L