| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_67200 |
|---|
| Symbol | |
|---|
| ID | 4383399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5997741 |
|---|
| End bp | 5998610 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639328021 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_793557 |
|---|
| Protein GI | 116053234 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00145906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG GACTTTGGGC CGTGCTCTGT CTTGCAGGCG TCCCCGTGAT GGCCAACAGC
AAACCATTTG TCTGCGCTAA TGAAAAAGAC CATCTGCCGC CGTTGGATCC GCAAGCCGAT
GCTTGGTACC GCGAAGCAGC AGCCTTGGCC AAGCCCGATA CTCTGCGGCC CTGGGGCCGT
ATCGTCGAGC TTTACAGCAA GGCAGTGGAG CGCGGTCATT GGAAGGCCAT GCATAATTTG
GCGAATCTTT ATCGTACAGG GTGGCCCGGA GGAGTAGAAA AAGATCCGCA GAAGGCATTG
GATCTCTATC AAAAGATGAT AGATCTGGAT GTGCCTCAGG GGTTCTATGA TATGGGGGCA
ATGATTGGTA ATCGTGCCGG TGTTAAGAAC CCTGCTACCG ATGGTCTGAC CTTCTTGGAT
AAAGCCGCTA GTTTGGGGAA CCCGCCAGCA CTGACCGAGT TGGGTAAACT CTATATTTAT
GTGGCCAAGG AAAAGGAATT GGGGCTGGCG TATACCAGTT GTGCTTCCAG TCAAGGTTAT
GCTCCGGCGA GCTATGAGCT TGGAAGCTAC TATGAGTTGG TTGAGCATAA TTATCCAAAG
GCACTTAGAT ACTATCAAGT CTCCGTCTCT CAAGGCGGCA GGAGTGCCGC CTTTTTTCTC
TCGCGCGTCT TCGGAAAGAG GACGCCTCCT TCAAGTGCAA TGTGGTATAC GCCGGATGAA
AAGCTTGAGA AATTCTACTA CTCCCTCTAT CTGCAAATTG ATGCCGACCC CGATCTTCGT
TTTCCCAATT TGGTAAAAGA TAACCCCTTG CCACCCCACC CCGTCCAGGG CTACGACGCA
GCTCGACCCG ACTGGAAGCC GGGTCAGTGA
|
|---|
| Protein sequence | MAIGLWAVLC LAGVPVMANS KPFVCANEKD HLPPLDPQAD AWYREAAALA KPDTLRPWGR
IVELYSKAVE RGHWKAMHNL ANLYRTGWPG GVEKDPQKAL DLYQKMIDLD VPQGFYDMGA
MIGNRAGVKN PATDGLTFLD KAASLGNPPA LTELGKLYIY VAKEKELGLA YTSCASSQGY
APASYELGSY YELVEHNYPK ALRYYQVSVS QGGRSAAFFL SRVFGKRTPP SSAMWYTPDE
KLEKFYYSLY LQIDADPDLR FPNLVKDNPL PPHPVQGYDA ARPDWKPGQ
|
|---|
| |