| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_66620 |
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| Symbol | pilQ |
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| ID | 4385523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5947116 |
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| End bp | 5949248 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639327973 |
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| Product | type 4 fimbrial biogenesis outer membrane protein PilQ precursor |
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| Protein accession | YP_793509 |
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| Protein GI | 116053188 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.601921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTG GCCTCTCGCG CCTCGGGATC GCTTTGCTGG CCGCCATGTT CGCGCCGGCA
TTGCTCGCCG CGGACCTGGA GAAACTCGAC GTGGCGGCAC TGCCTGGCGA CCGGGTCGAG
CTAAAGCTGC AGTTCGACGA GCCCGTCGCC GCGCCGCGTG GCTATACCAT CGAGCAGCCG
GCGCGAATCG CCCTCGATCT GCCGGGGGTG CAGAACAAAC TCGGCACCAA GAATCGCGAG
CTGAGCGTGG GCAATACGCG CAGCGTCACG GTGGTCGAGG CGAAGGATCG CACACGGTTG
ATCATCAACC TGACCACGCT GTCGTCCTAC ACCACCCGGG TGGAAGGCAA CAACCTCTTC
GTGGTGGTCG GCAATTCGCC GGCCGGCGCC AGCGTCGCTT CCGCCGCTCC GGTCAAGGCA
AGCCCGGCTC CGGCTAGCTA TGCCCAGCCG ATCAAGCCCA AGCCGTACGT GCCGGCGGGT
CGTGCCATCC GCAACATCGA TTTCCAGCGT GGCGAAAAGG GCGAGGGCAA CGTGGTCATC
GACCTGTCCG ACCCGACCTT GAGCCCGGAT ATTCAAGAAC AGGGCGGCAA GATCCGCCTG
GACTTCGCCA AGACCCAGCT GCCGGATGCG CTGCGGGTTC GCCTGGACGT CAAGGACTTC
GCCACGCCGG TGCAGTTCGT CAACGCCAGC GCGCAATCCG ACCGTACCAG CATCACCATC
GAACCGAGCG GGCTCTACGA CTATCTGGTC TACCAGACCG ACAATCGCCT GACCGTCAGC
ATCAAGCCGA TGACCACGGA AGACGCCGAG CGGCGCAAGA AGGACAATTT CGCCTATACC
GGTGAGAAAC TGTCGCTGAA CTTCCAGGAC ATCGACGTGC GTTCGGTACT GCAGCTGATC
GCCGACTTCA CCGACCTGAA CCTGGTGGCC TCGGATACCG TGCAGGGCAA TATCACCCTG
CGCCTGCAGA ACGTGCCGTG GGACCAGGCG CTGGACCTGG TGCTGAAGAC CAAGGGCCTG
GACAAGCGCA AGCTCGGCAA CGTGCTGCTG GTGGCCCCGG CCGACGAGAT CGCCGCCCGT
GAGCGCCAGG AGCTGGAAGC GCAGAAGCAG ATCGCCGAGT TGGCGCCACT GCGTCGGGAA
CTGATCCAGG TGAACTACGC CAAGGCCGCG GACATCGCCA AGCTGTTCCA GTCGGTTACT
AGTAGTGGCG AAGAGAAAGA AAATTCTCGT GGTTCGATTA CCGTAGATGA CCGTACCAAC
AGCATCATTG CCTATCAGCC GCAGGAGCGG CTGGACGAGC TACGCCGAAT CGTTTCCCAG
TTGGACATCC CGGTTCGTCA GGTGATGATC GAGGCCCGTA TCGTCGAGGC CAACGTGGGG
TACGACAAGA GTCTTGGTGT GCGTTGGGGT GGTGCCTACC ACAATGGCAA CTGGAACAGC
TACGGCAAGA ACGGCAACAT GGGCATCAAG GATAAGGAAG GTTACAACTG CGGGCCGTTC
CAGGGGCAGT GTACGTTCCC GACCAGAGAT AATTCTCCGA CCCCATTTGT GGATATGGGG
GCCAAGGATG CTAGTTCCGG TATCGGTATT GGCTTTATCA CCGATAACAT CATTCTTGAC
TTGCAATTAT CGGCTATGGA GAAAACCGGG AACGGCGAAG TGGTTTCGCA ACCCAAGGTC
GTAACTTCTG ACAAGGAAAC CGCGAAGATC CTAAAGGGAT CGGAGATCCC ATATCAGGAG
GCCAGTTCCA GTGGTGCGAC CAGCACCTCG TTCAAGGAGG CCGCTCTTTC TCTGGAGGTG
ACGCCGCAGA TCACTCCAGA CAATCGGATC ATCGTTGAGG TGAAGGTGAC CAAGGATGCT
CCCGACTTCC AGAATGCTTT GAATGGAGTT CCTCCGATCA ACAAGAACGA GGTTAACGCC
AAGATTCTGG TCAACGATGG TGAAACCATC GTTATCGGCG GTGTATTCAG CAACACCCAG
ACAAAGGCTG TCGACAAGGT ACCCTTCCTC GGTGACCTGC CTTACTTGGG CCGTTTGTTC
CGCCGCGATA CGGTCTCCGA TACGAAAAAC GAACTTCTGG TTTTCCTGAC ACCGCGGATC
ATGAATAATC AGGCCATCGC AATCGGTCGC TGA
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| Protein sequence | MNSGLSRLGI ALLAAMFAPA LLAADLEKLD VAALPGDRVE LKLQFDEPVA APRGYTIEQP
ARIALDLPGV QNKLGTKNRE LSVGNTRSVT VVEAKDRTRL IINLTTLSSY TTRVEGNNLF
VVVGNSPAGA SVASAAPVKA SPAPASYAQP IKPKPYVPAG RAIRNIDFQR GEKGEGNVVI
DLSDPTLSPD IQEQGGKIRL DFAKTQLPDA LRVRLDVKDF ATPVQFVNAS AQSDRTSITI
EPSGLYDYLV YQTDNRLTVS IKPMTTEDAE RRKKDNFAYT GEKLSLNFQD IDVRSVLQLI
ADFTDLNLVA SDTVQGNITL RLQNVPWDQA LDLVLKTKGL DKRKLGNVLL VAPADEIAAR
ERQELEAQKQ IAELAPLRRE LIQVNYAKAA DIAKLFQSVT SSGEEKENSR GSITVDDRTN
SIIAYQPQER LDELRRIVSQ LDIPVRQVMI EARIVEANVG YDKSLGVRWG GAYHNGNWNS
YGKNGNMGIK DKEGYNCGPF QGQCTFPTRD NSPTPFVDMG AKDASSGIGI GFITDNIILD
LQLSAMEKTG NGEVVSQPKV VTSDKETAKI LKGSEIPYQE ASSSGATSTS FKEAALSLEV
TPQITPDNRI IVEVKVTKDA PDFQNALNGV PPINKNEVNA KILVNDGETI VIGGVFSNTQ
TKAVDKVPFL GDLPYLGRLF RRDTVSDTKN ELLVFLTPRI MNNQAIAIGR
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