Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64920 |
Symbol | |
ID | 4384838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5786095 |
End bp | 5787720 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327845 |
Product | putative methyl-accepting chemotaxis protein |
Protein accession | YP_793383 |
Protein GI | 116053064 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTACTG GCGTCACGGT TCGAATCCGC CTGCTGGTCC TGGCGTTGCT GCCCCTGACG ATGCTCGTCA CGGTCATCGC GATGGCGCTG GCCAACGCCA GTCGACTCGA TGCCAGCTTC CAGGACCTTT TCAACAACCG GATGAAGCCC ATCAGCCAGC TCAAGATCGT CGCCGACGCC GTTGCGGTCA GCGTGGTCGA CGCCCTGCAC AAGTACCGTG CGGGCGTCTT CGATGAAGAG CGCCTGCAGC AGGAGTTGAG TGGGGCGCTG TCGCGCATCG AGAAGTCGTG GGCCGACTAT TCCGCAGACC ACCGGACTGC CGCCGAGAAG GAAATCATCG AGTCGCTGGT CCCCACCCTG GAACAGGTCA AGCGGATGAC CCTGGCATAC GGCGAGCAGG CCAGGGCCGG AAGCCTGCGA AACGTCGAGG CCGGCACGTT CAATCGCGAG ATGTATGGTG CGTTCGATCC GCTGGGAACC GCGCTGTCGA CGCTGATCGA CCTGCAACTC AGCGAAGGCG CCAAGCTCAA CGAGCAGATG GAGAAACGCT ACGACTCCAT GCGCACCACC TTCCTGCTCA TCGGCGCCGC AGCCCTGGTC CTCATCGTCG CCGCGGCCTG GTTCATCAGC CTGTCGATCA TGCGCCCGCT TTCCGATCTG CGCGGGGTGA TCCGCCGCGT GCAGGACTCC TCGAATCTCA CGCTCCGCGC CGATGCGCGC GGGCGCGACG AAGTGTCCGA TACGGCGCGC GCCTTCAATA TGATGCTGGA AAGCCAGCAG GCGCTGCTCC GCCATCTCGC CGAAACGGCC AGGAAGCTGA CCGTCACCTC GGACGAGATG AGCGCCATCA GCAACCAGGT CAGCCATGTC GCCACGTCCC AAGGCGACCA GACCGACATG GTCGCCACGG CGGTACACCA GATGAGCATG GCGGTCCAGG ACGTGGCGCG GAACGCCCAG GCCGCCGCGG CCAGCGCGGA ATCGGCGAAC AGCGAGGCGC ACACCGGAAC CGGCCTCGTG CATGCGAACC TCGACGCCAT CCAGGGCCTG TCGGTCATGG TCGGAGAGGC GGGAGCCGTC ATCGACACGC TACGCAACAA GACCGATGAA ATCAGCACCG TCCTGGAAGT CATCCAGAAC ATCGCCCAGC AGACCAACCT GCTCGCCCTC AATGCCGCGA TAGAAGCCGC ACGGGCGGGC GAGGCCGGAC GCGGGTTCGC GGTGGTCGCC GATGAAGTGC GCAGCCTGGC CACCAATACG CACAAGGCCA CCGAAACCAT CCGCGAGATG ATCGAAGCCC TGCAGGCAGG CGCCAGCAGC GCGGTCAGCG TGATGCAGCA GTCACGCGAG CAGGCCCAGG TCAGCGTCCA GCGCGCCCAC GAGGCGGGAA AGGCGCTCGG TCTCATCGCC CAGGCGATCG AAGGCATCGC CCAGAGCAAC GCGCAGATAT CCACGGCGAC GGAAGAACAG ACCGCCACCG CGAGCGAGGT CAGCCAGAAC ATCGACTCGC TCAATGCCAG CATCGGCGAA GTCGCCGAGG GCGCGGTGAA GACCTCCACC TCCAGTGTCG AGCTGGCGAA GCTGGCAAAC GGGCTGGAGC AGCAGATCCA GCGCTTCACC GTCTAG
|
Protein sequence | MLTGVTVRIR LLVLALLPLT MLVTVIAMAL ANASRLDASF QDLFNNRMKP ISQLKIVADA VAVSVVDALH KYRAGVFDEE RLQQELSGAL SRIEKSWADY SADHRTAAEK EIIESLVPTL EQVKRMTLAY GEQARAGSLR NVEAGTFNRE MYGAFDPLGT ALSTLIDLQL SEGAKLNEQM EKRYDSMRTT FLLIGAAALV LIVAAAWFIS LSIMRPLSDL RGVIRRVQDS SNLTLRADAR GRDEVSDTAR AFNMMLESQQ ALLRHLAETA RKLTVTSDEM SAISNQVSHV ATSQGDQTDM VATAVHQMSM AVQDVARNAQ AAAASAESAN SEAHTGTGLV HANLDAIQGL SVMVGEAGAV IDTLRNKTDE ISTVLEVIQN IAQQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRSLATNT HKATETIREM IEALQAGASS AVSVMQQSRE QAQVSVQRAH EAGKALGLIA QAIEGIAQSN AQISTATEEQ TATASEVSQN IDSLNASIGE VAEGAVKTST SSVELAKLAN GLEQQIQRFT V
|
| |