Gene PA14_64880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_64880 
Symbol 
ID4384834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5780919 
End bp5782196 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID639327841 
Productputative permease of ABC branched-chain amino acid transporter 
Protein accessionYP_793379 
Protein GI116053060 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AGACTTCCAT CGATCTCAAG CAGTGCGTCC TCGATGCCGT GCTCTCCGGG 
TTGATCGCCC TGGTGGTGTT CGGCCCCATC GTCGGCGTGG TCCTCGACGG CTACGGCTTC
AACCTGCATT ACGAGCGGGT CGGCTGGATC ATCGCGATCG TGATGGCCGG GCGCTTCCTG
CTCAGCCTCT ACCTGCAGAC CCGCGGCGGG CGGGCCGTGC TGGAGCGCTT CGAGGGGGCT
GGCAGCGGCG TCCACGTCCT GCCGCCGGGT TACAAGACCC GCTTGCGCTG GATCGTGCCG
CTGATCCTGG TGGCCGCGGT GATCTTCCCC TTCTTCGCCA GCAAGTACCT GCTGGCGGTG
GTCATCCTCG GCCTGATCTA CGTGCTGCTG GGCCTGGGCC TGAACATCGT GGTCGGCCTC
GCCGGGCTGC TTGACCTCGG CTACGTGGCC TTCTACGCCA TTGGTGCCTA TGGCCTGGCG
CTGGGCTACC AGTACCTCGG CCTGGGCTTC TGGACCGTCC TGCCGCTGGC CGCGCTGACC
GCCGCGGTGG CCGGGGCGAT CCTCGGCTTC CCGGTGTTGC GCATGCATGG CGACTACCTG
GCGATCGTCA CCCTGGGCTT CGGCGAGATC ATCCGCCTGG TACTGAACAA CTGGCTGTCC
TTCACCGGCG GGCCGAACGG CATGCCGGCG CCGGCGCCGA CCTTCCTTGG CCTGGAGTTC
GGCCGCCGGG CCAAGGATGG CGGGGTGCCG ATCCACGAGT TCCTCGGCAT CGCCTACAAC
CCCAACATGA AGTTCCTGTT CATCTACGTG GTGCTGTTCC TGGTCGTGCT GCTGGTGCTC
TACATCAAGC ACCGGCTGAC CCGGATGCCG GTCGGGCGCG CCTGGGAGGC GCTGCGCGAG
GACGAGATCG CCTGTCGCGC GATGGGCCTA AACCATGTGC TGGTGAAACT CTCGGCGTTC
ATGCTCGGCG CCTCCACCGC GGGACTGGCC GGGGTGTTCT TCGCCAGCTA CCAGGGCTTC
GTCAACCCGT CCTCGTTCAA CTTCTTCGAG TCGGCGCTGA TCCTCGCCAT CGTCGTGCTC
GGCGGCATGG GCTCGACGGT CGGGGTGGTG ATCGCCGCCT TCGTCCTCAC CGTGGCGCCG
GAGCTGCTGC GCAGCTTCGC CGACATCCGC GTGCTGCTGC TCGGGATACT CATGGTGGTG
ATGATGATCT GGCGGCCGCG CGGGCTGATC CGCATCAGCC GGGTGGGCTT CGCCCCGCGC
AAGGGGGTGG CGCCATGA
 
Protein sequence
MSNETSIDLK QCVLDAVLSG LIALVVFGPI VGVVLDGYGF NLHYERVGWI IAIVMAGRFL 
LSLYLQTRGG RAVLERFEGA GSGVHVLPPG YKTRLRWIVP LILVAAVIFP FFASKYLLAV
VILGLIYVLL GLGLNIVVGL AGLLDLGYVA FYAIGAYGLA LGYQYLGLGF WTVLPLAALT
AAVAGAILGF PVLRMHGDYL AIVTLGFGEI IRLVLNNWLS FTGGPNGMPA PAPTFLGLEF
GRRAKDGGVP IHEFLGIAYN PNMKFLFIYV VLFLVVLLVL YIKHRLTRMP VGRAWEALRE
DEIACRAMGL NHVLVKLSAF MLGASTAGLA GVFFASYQGF VNPSSFNFFE SALILAIVVL
GGMGSTVGVV IAAFVLTVAP ELLRSFADIR VLLLGILMVV MMIWRPRGLI RISRVGFAPR
KGVAP