Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63520 |
Symbol | |
ID | 4383275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5662476 |
End bp | 5663159 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327733 |
Product | putative transcriptional regulator |
Protein accession | YP_793271 |
Protein GI | 116052954 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.498884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCC TGGAACGCAA GGGCCACGCG CCCACCCTGC TCTACGAGCG CGGCATCGCC GAGCGCTTCC GCGAGGCGAT CATCCGCCGC TACTTCTCCC GCGGCTACCT GCTCGACCCT TTCTGCCTGG CGGTGGAGGA AGGCCTTCCG GAAGGCTTCT ACACCCTCGG CGAGATCGCC CCCGACGACT TCTTCCAGAG CGCCTACTAC CAGACCTACT ACCTCGGCGC CGGAGCGGTG GAGGACGTCT ACTACATCCT CGACCTCGGC CCCACCGAGA AGCTCTCGAT CTGTCTCTAC AACGGCCTTT CGGCGAGCCG CTACAGCGAC GCCCAGGTCG CCGCCCTCGC CGGCCTGGCG CCGCCGGTGC TGGAGCTGGC CCGGCAGTTC TGCGCCGGCC GCGCCAACCT CTCGCCGAAC CCGCAGGCCG ACCTCGCCCC GCGCCTTCAG GAAGTGCTGC GCGGCTTCGG TCGCGGCGTG CTCACCGACC GCGAACGCGA GGCCTGCCAC CTGCTGCTCA GCGGCCACTC GGCGAAATCC AGCGCGCGGC TGATGGACAT CTCCCCGGAG ACCGTGCGCA TGCACCGGAA GAATCTCTAC ACCAAGCTGG AAGTCGGCTC GCAGTCGGAA CTGTTCGCGC TGTTCATCGA GTGCCTGAGC CAGGGGCAGC GCGTCGCCCC CTGA
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Protein sequence | MISLERKGHA PTLLYERGIA ERFREAIIRR YFSRGYLLDP FCLAVEEGLP EGFYTLGEIA PDDFFQSAYY QTYYLGAGAV EDVYYILDLG PTEKLSICLY NGLSASRYSD AQVAALAGLA PPVLELARQF CAGRANLSPN PQADLAPRLQ EVLRGFGRGV LTDREREACH LLLSGHSAKS SARLMDISPE TVRMHRKNLY TKLEVGSQSE LFALFIECLS QGQRVAP
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