Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63110 |
Symbol | |
ID | 4383222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5633510 |
End bp | 5633992 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327698 |
Product | putative S-adenosylmethionine decarboxylase proenzyme |
Protein accession | YP_793237 |
Protein GI | 116052920 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1586] S-adenosylmethionine decarboxylase |
TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00178537 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTC AACCGTTGCG ACTCGATCCG ATCACCGTGC TCGGCAAGCA ACTGGTCATC GAGCTGTTCG ACTGCGTCGA CCAGCGCTTC GACGATATCC AGTGGATCGA GGAAAGCATG CTCGAGGCCG CCCGCCAGGC CAACGCCACC ATCATCACCT CGGCGTTCCA CAAGTTCAGC CCGATCGGCA TCTCCGGCGT GGTGGTGATC GCCGAATCGC ACCTGGCGAT CCATACCTGG CCGGAGTACG GCTATGCCGC GGTCGACGTG TTCACCTGCG GCGACGTGCT CGATGGCGCC CAGGCCGTGC GCGTGCTCAG CGAACGCCTG GGCAGCCGTC GGCACCTGAT CTCGAGCATG GACCGCGGCC TCGGCGGCCA TCGCCTGGGG CTGCTCAGCC GCAGCCTGGC CGGCAATGGC CCGGTCGACG AAGACAGCCC GACCCTGCGC TGGGCGCTGG GCCAGGGCAC GGGGGTGGCC TGA
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Protein sequence | MAIQPLRLDP ITVLGKQLVI ELFDCVDQRF DDIQWIEESM LEAARQANAT IITSAFHKFS PIGISGVVVI AESHLAIHTW PEYGYAAVDV FTCGDVLDGA QAVRVLSERL GSRRHLISSM DRGLGGHRLG LLSRSLAGNG PVDEDSPTLR WALGQGTGVA
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