| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_61280 |
|---|
| Symbol | |
|---|
| ID | 4381718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5470313 |
|---|
| End bp | 5471338 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639327543 |
|---|
| Product | putative epimerase |
|---|
| Protein accession | YP_793091 |
|---|
| Protein GI | 116052774 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAAC AGCCACTCTC ACGCCCTGGA GCTCATGTGA AATACGCCGT ACTCGGAGCC
ACCGGCCTGC TGGGACATCA CGCCGCGCGC GCCATCAGGG CCGCCGGTCA CGATCTGGTG
CTGATCCACC GTCCTTCTTC GCAGATCCAG CGTCTCGCCT ATCTGGAGCC CGAGTGCCGG
GTCGCCGAGA TGCTCGACCA CGCCGGCCTG GAACGCGCCC TGCGCGGCCT CGACGGGGTG
ATCTTCAGCG CCGGCTACTA TCCTTCGCGG CCGCGCCGCT GGCAGGAGGA AGTGGCCAGC
GCGCTGGGCC AGACCAACCC GTTCTATGCC GCCTGCCTGC AGGCCAGGGT GCCGCGCATC
CTCTACGTCG GTTCGGCATA TGCCATGCCC CGGCATCCCC AGGGACTACC GGGGCACGAG
GGGTTGTTCT ACGACAGCCT GCCGAGCGGC AAGAGTTCCT ACGTGCTGTG CAAATGGGCG
CTCGACGAGC AGGCCCGGGA GCAGGCGCGC AACGGCCTGC CGGTGGTGAT CGGGATCCCC
GGCATGGTAC TCGGCGAACT GGACATCGGC CCGACCACCG GACGCGTGAT CACCGCCATC
GGCAATGGCG AGATGACCCA CTACGTCGCC GGCCAGCGTA ACGTCATCGA TGCCGCCGAA
GCCGGGCGCG GCCTGCTGAT GGCCCTTGAG CGCGGGCGTA TCGGCGAGCG CTACCTGCTG
ACCGGGCACA ACCTGGAAAT GGCCGACCTG ACCCGGCGCA TCGCCGAGCT GCTCGGCCAG
CCTGCGCCGC AGCCGATGTC GATGGCCATG GCTCGCGCGC TGGCCACCCT GGGCCGCTTG
CGCTACCGGG TCAGCGGCCA GTTGCCGCTG CTCGACGAAA CCGCCATCGA GGTGATGGCT
GGCGGGCAGT TCCTCGATGG ACGCAAGGCC CGCGAGGAAC TCGGCTTCTT CTCCACCACC
GCCCTCGACG ACACCCTGCT GCGCGCCATC GACTGGTTCC GCGACAACGG CTATTTCAAT
GCCTAG
|
|---|
| Protein sequence | MDEQPLSRPG AHVKYAVLGA TGLLGHHAAR AIRAAGHDLV LIHRPSSQIQ RLAYLEPECR
VAEMLDHAGL ERALRGLDGV IFSAGYYPSR PRRWQEEVAS ALGQTNPFYA ACLQARVPRI
LYVGSAYAMP RHPQGLPGHE GLFYDSLPSG KSSYVLCKWA LDEQAREQAR NGLPVVIGIP
GMVLGELDIG PTTGRVITAI GNGEMTHYVA GQRNVIDAAE AGRGLLMALE RGRIGERYLL
TGHNLEMADL TRRIAELLGQ PAPQPMSMAM ARALATLGRL RYRVSGQLPL LDETAIEVMA
GGQFLDGRKA REELGFFSTT ALDDTLLRAI DWFRDNGYFN A
|
|---|
| |