Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61050 |
Symbol | mscL |
ID | 4382980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5444712 |
End bp | 5445125 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639327525 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_793073 |
Protein GI | 116052756 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 77 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTCTTC TGAGTGAATT CAAAGCCTTT GCCGTCAAGG GCAATGTCGT GGATATGGCT GTCGGTATCA TCATCGGCGC GGCCTTCGGC AAGATCGTCT CGTCCTTCGT GGGCGATGTG ATCATGCCGC CGATCGGACT GCTGATCGGC GGAGTCGACT TCTCCGACCT GGCGATAACA TTGAAGGCCG CCGAAGGCGA CGTGCCGGCG GTGGTGCTGG CCTATGGCAA GTTCATTCAG ACCATACTCG ACTTCGTCAT CGTGGCCTTC GCCATCTTCA TGGGGGTCAA GGCGATCAAC CGCCTCAAGC GCGAAGAAGC CGTCGCGCCG TCCGAACCGC CAGTGCCGAG TGCCGAGGAA ACCCTGCTGA CCGAGATCCG CGACCTGCTG AAAGCCCAGC AGAACAAGTC ATGA
|
Protein sequence | MGLLSEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPIGLLIG GVDFSDLAIT LKAAEGDVPA VVLAYGKFIQ TILDFVIVAF AIFMGVKAIN RLKREEAVAP SEPPVPSAEE TLLTEIRDLL KAQQNKS
|
| |