| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59750 |
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| Symbol | cupD4 |
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| ID | 4385469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5317504 |
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| End bp | 5318850 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639327411 |
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| Product | fimbrial subunit |
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| Protein accession | YP_792963 |
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| Protein GI | 116052648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000441836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 2.5403100000000004e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAT CCCTGCGCGT CCTGCCTCTG CTCCTCGCGC TGCTCGCCTC GTCTAGCTGG
GCGACCTGCT ACAAGGTCAC GGCGGTAGGC AACGCCACGA CTACCTCCAA CACCCAGATA
CGTCCCGGTG AAGGCTCTGC CGGCACCTGG GCCGGAGCCT GCGATACCTG CAACGGTTCC
CTCGGTCTAC CGAGCGTGAT CAACGTCAGC GACGCCAGCT TCCAGCCCGA CGGTAGCTTG
ATCGCCAGCT CGGTGGCGCC GCTCAGCCAA TACGGCGACA GCGCCGGCTA CGACCCAGAG
CGCGTGTTCT TCCGCTGTGC TCCAGAGGAC GATGTGTACG AGATGTTCTC CACCAATGCC
GACGATCTCT ACAGCGGCTG GTACCTAGGA GGCGACAGTG CGGGCAACTC GATTGGCCTG
CAGTCCGCCT ATCGCACCGC CTGGCCCAAC GTGCTGCTGC GCCTAACCCA CGTGGAAACC
GGGCAGTATT TCACCGATGT CTGGCGCGAG CGTCTGCTCG GCGGGCTCGA TATCGACTCG
CGAGGCTTTC AACTGGTCAA GGCGAAGAAC CTCAGCGCGG TACGCGCCGA ACTGTTCCGC
GCTCCGCTGG AGTTCATCCG CTACTACTCG CCGACTACCG CCTCGCGGTT GTACGCCTAC
ACCCAGCCCG CTGGCTACAT CGCCATCAAG GGTCCCGGCC TGGCCTACCC CAACGTCGGC
GCCAGCCATA ACGCCAACTA CCTCGGCTGG CACTACAACT GGCCGGGCGC CATCGGCCTG
TACAACGACG TGACGCTCAA GCGCTATCCC ACCTGTTCCG TAACCAACGT CACGCCCCAC
GTTGTGTTCC CGTCGATTTC CCTCAGTGAG ATTAATGCCG GCGCGAACCG TGAGATGCCC
TTCGAGGTGG CCTTCAAGTG CCAAACGGGA GTGATCAACA GCACCGCCTC CAGCGGTACT
GCACTGGGTA TCAGGGCTTC AGCCGGGGCG CAGGCCGCGT CCGCTGCACT GGGCCTGAGG
AACGCCAATG GCGGGCTCTC CTACCTAGTT TCCGACCGCT ACGGCCAGCC TGGTATGGCC
CAAGGCGTGG GTATCCGCTT GCTGCGCGAC GGCAGTGCGA TGAACCTGCT GGTAAGCGAG
GATTCCGCGA TGGGCAGCAA TGCCGAAACA CGGGGCTGGT ATCCAGTGAT CGGCAACGCC
TCGAACAAGA CTGGCGAAGC GGGAGGCATC AGCCAGTACA GCGAGACCTT CCGTGCGCGC
CTGGAAAAAC TCACCGTTGG CAGCATGCCC AGCGTTACCC CGGGACGGGT GGAGGCCAGC
GCGCAGGTAG TGATTCGTGT CCAGTAA
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| Protein sequence | MKTSLRVLPL LLALLASSSW ATCYKVTAVG NATTTSNTQI RPGEGSAGTW AGACDTCNGS
LGLPSVINVS DASFQPDGSL IASSVAPLSQ YGDSAGYDPE RVFFRCAPED DVYEMFSTNA
DDLYSGWYLG GDSAGNSIGL QSAYRTAWPN VLLRLTHVET GQYFTDVWRE RLLGGLDIDS
RGFQLVKAKN LSAVRAELFR APLEFIRYYS PTTASRLYAY TQPAGYIAIK GPGLAYPNVG
ASHNANYLGW HYNWPGAIGL YNDVTLKRYP TCSVTNVTPH VVFPSISLSE INAGANREMP
FEVAFKCQTG VINSTASSGT ALGIRASAGA QAASAALGLR NANGGLSYLV SDRYGQPGMA
QGVGIRLLRD GSAMNLLVSE DSAMGSNAET RGWYPVIGNA SNKTGEAGGI SQYSETFRAR
LEKLTVGSMP SVTPGRVEAS AQVVIRVQ
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