| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59340 |
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| Symbol | pilT2 |
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| ID | 4382740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5285345 |
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| End bp | 5286286 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327375 |
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| Product | type IV B pilus protein |
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| Protein accession | YP_792927 |
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| Protein GI | 116052612 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000971289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000000000867838 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGTGTGA ACCCGATCAT CCAGGCTCAG TTCGTCGACC TCTACCTCGG TGAAGGCTTC
GCCGACGTGA AAGGCCTGGC CGGCGCCGGC GCGCGCCGAG TCGAAGTGCC TCGCGAGTGG
GAGTCGCACG TCCAGGAACT GCTCCAGATC TGCAGGCAAA CGCTGGAGGA GCTGCAGGAC
CCTGAGTTCG CCATCGTCGT CGACGGCGTT CTGCTTCGCG TCACCCTCCT CGAAGACGCT
TTCAGTGGCA GCGTCTTCGT GCTGCGCCGG TCGAGCGCCC AATTGCGGGA GTTCCAAGAG
ATCGGCTATC CGAGCGAAGT GGTTTCCGCA CTGATGGATC CGCAGTTGCA GGGCCTGGTC
CTGTTCTGCG GCGAGATGGC GACAGGCAAG ACCAGCTCCG CCGCCTCTCT GCTCCTGGCC
CGCCTGCAGG AGTTGGGCGG GGTGGGCTGC GCCGTCGAGG ACCCGCAGGA AACCAACCTC
AGCGGTCAGC ATGGGCTCGG CCGCTGCATC CAGGTCAGAA CCTCACGGCG CTCAGGCGGA
TACAGCGAGG CCCTGCTGCG CACGCTGCGG GCCGGCGCCG ACCTGGTGCT GATTGGCGAG
ATCCGCGACG AGGACACCGC CTACCAGGCC TGCAAGGCCT CTCTGACCGG CAGCCTGGTG
ATCGCCACCA TTCACGCGAA AAGCTGTCAT CAGGCGATCG AGCGCTTGGT GACGCTCGCC
CAGCCACTGG CGAGAAACGC CTACGACGTG GTTGCCGAAG GCATCCAAGC TGTGATCTGC
CAAGCGCTGG AGAGCGATGG TTCCTCGCGC CGCCTGACCG CCGAGCCACT GCTGTTCACT
GGCGACGACG GCCCGTCCAT GCGCGACAAG ATCCGCCGAA AGGAGGCTCA TCTGCTGCAG
GACGACCAAG CTCGCCAGTC CCGGCAAAGC CTATGGAGAT AA
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| Protein sequence | MSVNPIIQAQ FVDLYLGEGF ADVKGLAGAG ARRVEVPREW ESHVQELLQI CRQTLEELQD
PEFAIVVDGV LLRVTLLEDA FSGSVFVLRR SSAQLREFQE IGYPSEVVSA LMDPQLQGLV
LFCGEMATGK TSSAASLLLA RLQELGGVGC AVEDPQETNL SGQHGLGRCI QVRTSRRSGG
YSEALLRTLR AGADLVLIGE IRDEDTAYQA CKASLTGSLV IATIHAKSCH QAIERLVTLA
QPLARNAYDV VAEGIQAVIC QALESDGSSR RLTAEPLLFT GDDGPSMRDK IRRKEAHLLQ
DDQARQSRQS LWR
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