Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_59070 |
Symbol | |
ID | 4382698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5260394 |
End bp | 5262133 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639327352 |
Product | hypothetical protein |
Protein accession | YP_792904 |
Protein GI | 116052589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000160429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0321205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGG CCAAGATCAA CCCGCAAGAT CTGAAAGACC GGCTACTTGC CCCTGGTTTT ACCGCACCGC CCAAGGTTCT GGAGCAGTTG TCGGACCCGA TCAGCGACAC GCCCATGAGG CTGACACTCC ACGACGTCCT CCCCTGGCAC GATAACCCCC GGACCACTCG AAACCCGAAA TACGATGAGC TGAAAGAATC GATCCGACAT CGAGGCCTCG ATACGCCGCC ACCAGTGACT CGACGCCCTG GAGAGGACAA ATACCGCATT CGCAACGGCG GAAACACTCG CCTGGAAATT CTCAACGACC TCTACAAAGA GACCGGAGAC GAGCGCTATT TCAGCTTCGA CTGCCTGTTC AAGCCCTGGG ACAAGCAGCG CGGCGAAATC ATCGCGCTGA CCGGTCATTT GGCCGAGAAC GATCTGAAGG GCGACCTCAA GTTCATCGAG CGCGCGGTTG GGGTGCAGAA GGCGAAATTT CTTTACGAAC AAGAGAACGG CGGTGAAAGC ATTTCCCAGC GCGAGTTGGC ACGTCGGCTA AAAGCGGACG GCTACCCTGT ATCTCAATCC CATATCAGTA AGATGTTAGA CACTATTGAG GTATTGGCGC CGGCGATTCC TGTGATGCTG TATTCAGGGC TCGGTAAACC GCAAATCGAG AAACTCCTGT CACTCAGAAA GTCGGCATCC TCCTGCTGGG CACGTCTATA CGCTGGTGAA GGGGTTGACT TCGAAATGCT GTTCCAGGAC ACCCTGGCAA TCTTCGACAG TAGCCCTGAC GAATTCATTT TCGAGCGTTT CCAGGACGAA CTCATCGACC AAATGAAGCG CCCCCTGGGC CTGCGTTATG ACCAAATCCT GCTCGAGATT ACCAACGGGC AGCAGGAGCA ACGCCGCGGC ACTCTGGTCG ACCTGCCCAC ACCTGCCGCA CCACCTCAAC TCCCACCAAT TGGGCAGGAA AACCCTGCTG CGTCGTCTAC TGGACAAGCA CAAACACAGA GCCCCGCCGC AGATCCCCAA ACGTCCAGGA CAAGGAGCAA CCCGGGTAAT CCCCTCCCCC CGCCGGCTCC GCCACCACCT GTCCAACAAA AGCAATTGCC CGATGAGGAG CGTGCGGCGG TCTTGGCAGG CCATATCGTG AGCCCGGTAT CGACTAAGAT CCAGCAGACT CGCCAACGGC TGGCCGGCCT CGAGGGGGAA CATCTACCTG TCTTCGATGA AACAGCTCTG CAGGCAATCC CAGTGCAAGT CGGTGGCCTG CACCCGATCA CCGATCTCTG GTACATCGAG CGGTCGATCG ATACCCCCGA GATCCTGCGA CAGCACATCG CTGATCTGGC TGAAGAGATC GCTCTGCATG TCGGCGCCCC AGGCGAGATC GTCAGGATTC AGGGCGGTGT GGGTTACACG TATCGCGAGC CCAATGAAGA CCATGAGATT ACTGATTCAG CGCTGCACCT CATGACGCTG CTTCAAGCGG TCAGCGGGCA GGTCCAAGTC GTTCTGAACA CTCACGATCA ACAGACCTGC CGCGATGCAC TGGGTGAATT CCAGTTCTCA GCTGGCCTCG CTCAGTTGCT GCTGGGCCAA CCCACCACAA GTGACAAGCC ATCCTGCCAG GCAGGCCGTC TCAATGACGA AGCCCTGGTG AAACTGTTCC GGATCATTCG TCTTGCCCGA CGCCTGGTTG ACCTTGAGCT GCCGCCGGCC GCCTCCGAGC AAGCAGCTAC TGACCAGTGA
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Protein sequence | MSMAKINPQD LKDRLLAPGF TAPPKVLEQL SDPISDTPMR LTLHDVLPWH DNPRTTRNPK YDELKESIRH RGLDTPPPVT RRPGEDKYRI RNGGNTRLEI LNDLYKETGD ERYFSFDCLF KPWDKQRGEI IALTGHLAEN DLKGDLKFIE RAVGVQKAKF LYEQENGGES ISQRELARRL KADGYPVSQS HISKMLDTIE VLAPAIPVML YSGLGKPQIE KLLSLRKSAS SCWARLYAGE GVDFEMLFQD TLAIFDSSPD EFIFERFQDE LIDQMKRPLG LRYDQILLEI TNGQQEQRRG TLVDLPTPAA PPQLPPIGQE NPAASSTGQA QTQSPAADPQ TSRTRSNPGN PLPPPAPPPP VQQKQLPDEE RAAVLAGHIV SPVSTKIQQT RQRLAGLEGE HLPVFDETAL QAIPVQVGGL HPITDLWYIE RSIDTPEILR QHIADLAEEI ALHVGAPGEI VRIQGGVGYT YREPNEDHEI TDSALHLMTL LQAVSGQVQV VLNTHDQQTC RDALGEFQFS AGLAQLLLGQ PTTSDKPSCQ AGRLNDEALV KLFRIIRLAR RLVDLELPPA ASEQAATDQ
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