| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55660 |
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| Symbol | recD |
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| ID | 4384616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4962745 |
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| End bp | 4964910 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639327075 |
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| Product | exodeoxyribonuclease V alpha chain |
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| Protein accession | YP_792628 |
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| Protein GI | 116052317 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.866156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGA CCCTCAAGCA ACTGGCCGGC GAAGTCCGCG ATGGCCGCGA CGACCAGGTA
GCGCAACCGC TGGCGGTACG CCACGACCTG CTGCGCCAGC TCGACCTGTG GGTGGCGCGC
GGCTGGCTAC GGGCGCTGGA CCGGGCGTTC GTCGCCTTCC TCGTCGAGCT GCAGCCGCAG
GCCGATCCCC GGGTGCTGCT GGCGGCGGCG CTGACCAGCC ACCAACTGGG CCACGGGCAC
GTCTGCCTGG ACCTGGAGGC GACCCTCGGT GCGCCTGACG CGGCACTGTC GCTGCCGCCG
GAAGGCGACG AAGGCCGCGA TGTGCTGCTG CCGTCGCAAC TGCTGCGCGG CGTGCGCCTC
GACGCCTGGC GCGAGGCCCT GGCGGCGTCA TCGCTGGTGG AGGTGGTCGA CGAGCGCCCA
GGCGATCCCG AGCCGAGCGA GACGGCGACC TCGCCGCTGG TGCTTTGCGC TCAGCGTCTC
TACCTGCGTC GCTATTGGCG GCACGAGCTG GAGATCGCCC TGGCCCTGCG CGAGCGCCTG
GGTCGGCAGG CGCCCCTGGC CGCAGACCTG GCGCCGCGCC TGGCCGCGCT GTTCGCGCAG
GCGCCGACGG AAGACGGCCA GCGCGTCACC GACTGGCAGA AGCTGGCCTG TGCCCTGGCG
GCCCGCGGCT ATTTCAGCCT GATCACCGGC GGTCCCGGTA CCGGCAAGAC CACCACCGTG
GTGCGCCTGC TCGGTCTGCT CCAGGCACCG GCGGTAGCCG CCGGCCAGCC GCTGCGCATC
CGCCTCGCGG CACCCACCGG CAAGGCCGCG GCGCGTCTCT CCGAGTCCAT CGGCCAGCAG
GTCCGGGCCC TGCCGCTGGC GGAAGACGTG TTGCAGGCGA TCCCCGCCGA GGTCACTACC
CTGCACCGTC TGCTCGGCAG CCGTCCGGAT ACCCGGCACT TCCGCCACCA CCGGGACAAC
CCTTTGGCGC TGGACGTGCT GGTGGTGGAC GAGGCCTCGA TGATCGACCT GGAAATGATG
GCCAGCCTGC TCGATGCGCT ACCGCCGCAG GCGCGCCTGA TCCTGCTCGG CGACAAGGAC
CAGTTGGCCT CGGTAGAGGC CGGCGCGGTG CTCGGCGATC TCTGCCGGGA TGCCGAGGAG
GGCTGGTACA GCGCCGAGAC CCGCGCCTGG TTGCAGCGGG TCAGCGGCGA AACCTGGCAG
GGCTTGCGCG AAGGTTCGGC GCAGGCGCAT CCGCTGGCGC AACAGACCGT CATGCTGCGG
CATTCCCGGC GCTTCGGCGC GAGCAGCGGG ATCGGGCGCC TGGCGCGGCT GGTCAACCGG
CAACAGGCCG GCGACGCGCG CGCGCTGCTG GACAGTCCGC CCGCCGACCT CTTCGACCTG
CGCCTGCGCG GGGAGCGCGA TGCAGCCTTC GCCCGGCTGT TCGTCGACGG TCATCCGCAG
GCGCCGGGCA CGCCGTACGG CTACCGGCAC TACCTGCAAC GCCTGGCCGA GGGCCGCCCG
GCCGCCGGAC TGGCGCTGGA GGATGGCGCC TGGGAGCGCT GGGCGCAGTC GGTACTGACG
GCTTTCGACG CCTTCCGCCT GCTCTGCGCG CTGCGCCGCG GCCCATGGGG CGTGGAAGGA
CTGAACCAGC GGGTGGCGGC GGAACTGCTG CGCCTTGGCC TGATCGAGGC CGATCACGGC
TGGTACGAGG GGCGGCCGGT ACTGGTGACG CGCAACGACT ACAGCCTGGG GCTGATGAAC
GGCGATATCG GCATCGCCCT GCGCCTGCCC GAGCGCAACG ATGACGGCAG CCTGCGCTTC
GCGCTGCGCG TGGCCTTCCC GCGCAACGAC GGTAGCGGCG GCGTGCGCTT CGTCCTGCCG
AGCCGCCTGG TCGAGGTGGA CACCGTGTTC GCCATGACCG TGCACAAGTC GCAGGGCTCG
GAGTTCGCCC ATACCGCGCT GGTCCTGCCG GACGCGCTGA ACCCGGTGCT GACCAAGGAG
CTGGTGTACA CCGGTATCAC CCGCGCCCGC GACTGGTTCA GCCTGGTGGA AAGCCTGCCC
GGGGTGTTCG AGGAAGCAGT GCGGCGCAAG GTGCGCCGGC TCAGCGGGCT GATGCTGCAT
CTGCGGCCGG AAAGGGAAGA GCAGCCGCCG CATGCTCCGG GTGAACAGAC CGAGCTGCCG
TTCTGA
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| Protein sequence | MNPTLKQLAG EVRDGRDDQV AQPLAVRHDL LRQLDLWVAR GWLRALDRAF VAFLVELQPQ
ADPRVLLAAA LTSHQLGHGH VCLDLEATLG APDAALSLPP EGDEGRDVLL PSQLLRGVRL
DAWREALAAS SLVEVVDERP GDPEPSETAT SPLVLCAQRL YLRRYWRHEL EIALALRERL
GRQAPLAADL APRLAALFAQ APTEDGQRVT DWQKLACALA ARGYFSLITG GPGTGKTTTV
VRLLGLLQAP AVAAGQPLRI RLAAPTGKAA ARLSESIGQQ VRALPLAEDV LQAIPAEVTT
LHRLLGSRPD TRHFRHHRDN PLALDVLVVD EASMIDLEMM ASLLDALPPQ ARLILLGDKD
QLASVEAGAV LGDLCRDAEE GWYSAETRAW LQRVSGETWQ GLREGSAQAH PLAQQTVMLR
HSRRFGASSG IGRLARLVNR QQAGDARALL DSPPADLFDL RLRGERDAAF ARLFVDGHPQ
APGTPYGYRH YLQRLAEGRP AAGLALEDGA WERWAQSVLT AFDAFRLLCA LRRGPWGVEG
LNQRVAAELL RLGLIEADHG WYEGRPVLVT RNDYSLGLMN GDIGIALRLP ERNDDGSLRF
ALRVAFPRND GSGGVRFVLP SRLVEVDTVF AMTVHKSQGS EFAHTALVLP DALNPVLTKE
LVYTGITRAR DWFSLVESLP GVFEEAVRRK VRRLSGLMLH LRPEREEQPP HAPGEQTELP
F
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