Gene PA14_55230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55230 
Symbol 
ID4382549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4905076 
End bp4905981 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID639327034 
Producthypothetical protein 
Protein accessionYP_792592 
Protein GI116048609 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.226286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000000221588 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTTCT TCCTGCGCTA CGCCTACGCG CCCCTCTTCT GGTCCGGCTT CATCGGCCTG 
GCGACCTGGC AGGTCGGCTA TCGCCAGGCT TCCCACGCCT GGCTGGTCGC CCTGTTCCTC
GGGGCGCTCG GCCTGTCCTT TCTCGCCGAA CGACGACTGC CCTACCAGCC ACGCTGGAAC
CGGCCGCACG CCGACCGCCT GCGCGATGTC CTGCACGCGT CGGTCAACGA AAGCCTGAAC
GCACTTGGCA TCCTCGCCCT GCCACTGCTG GCCGGAGTCC TGAGCTTCTG GCCGGTGTGG
CCGCAGGCCT GGCCGCTGTG GCTGCAACTG CTGCTGGCGA TCGTCCTGGC CGATCTCGGC
ATCACCCTGG TGCACTACGC CAGCCACCGT TCGGCGCTGC TTTGGCGGCT GCACGCGGTG
CACCATAGCG TGCAGCGCCT GTACGGTTTC AACGGTCTGA TGAAACATCC CCTGCACCTG
GGCCTGGAAG CGCTCGGCGG CACCCTGCCG CTGTTGCTGC TCGGCGTGCC GCAGACGGTC
GCCGCGCTGC TCGCCTTCGC CATCGGCATC CAGTTGCTGC TGCAACACAG CAACGTCGAC
ATGCGCATCG GCGGGTTACG CCATGTGTTC GCCTGGGCAC CGCTGCATCG CCTACACCAC
ATCCGCTACG GGCGCGCCGG CGACGTCAAC TTCGCGCTGT TCTTCAGCGT CTGGGACCGC
CTGCTCGGCA CCGCCCTCCA TCGTCCCGAC TACCGCCTGG ACAGCACCGA CATGGGCATC
GGCGACCAGC CTGACTATCC CCGCGACTAT GCCGGCCAGT TGCTCGCGCC ATTCCGCGAC
CTGCCACGCA GCAGGCACGT CCCACAGCCG CCGGAAGGAT TGGGGCGTTC AGCCGGCCAG
GCGTAG
 
Protein sequence
MQFFLRYAYA PLFWSGFIGL ATWQVGYRQA SHAWLVALFL GALGLSFLAE RRLPYQPRWN 
RPHADRLRDV LHASVNESLN ALGILALPLL AGVLSFWPVW PQAWPLWLQL LLAIVLADLG
ITLVHYASHR SALLWRLHAV HHSVQRLYGF NGLMKHPLHL GLEALGGTLP LLLLGVPQTV
AALLAFAIGI QLLLQHSNVD MRIGGLRHVF AWAPLHRLHH IRYGRAGDVN FALFFSVWDR
LLGTALHRPD YRLDSTDMGI GDQPDYPRDY AGQLLAPFRD LPRSRHVPQP PEGLGRSAGQ
A