Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55230 |
Symbol | |
ID | 4382549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4905076 |
End bp | 4905981 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327034 |
Product | hypothetical protein |
Protein accession | YP_792592 |
Protein GI | 116048609 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.226286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000221588 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGTTCT TCCTGCGCTA CGCCTACGCG CCCCTCTTCT GGTCCGGCTT CATCGGCCTG GCGACCTGGC AGGTCGGCTA TCGCCAGGCT TCCCACGCCT GGCTGGTCGC CCTGTTCCTC GGGGCGCTCG GCCTGTCCTT TCTCGCCGAA CGACGACTGC CCTACCAGCC ACGCTGGAAC CGGCCGCACG CCGACCGCCT GCGCGATGTC CTGCACGCGT CGGTCAACGA AAGCCTGAAC GCACTTGGCA TCCTCGCCCT GCCACTGCTG GCCGGAGTCC TGAGCTTCTG GCCGGTGTGG CCGCAGGCCT GGCCGCTGTG GCTGCAACTG CTGCTGGCGA TCGTCCTGGC CGATCTCGGC ATCACCCTGG TGCACTACGC CAGCCACCGT TCGGCGCTGC TTTGGCGGCT GCACGCGGTG CACCATAGCG TGCAGCGCCT GTACGGTTTC AACGGTCTGA TGAAACATCC CCTGCACCTG GGCCTGGAAG CGCTCGGCGG CACCCTGCCG CTGTTGCTGC TCGGCGTGCC GCAGACGGTC GCCGCGCTGC TCGCCTTCGC CATCGGCATC CAGTTGCTGC TGCAACACAG CAACGTCGAC ATGCGCATCG GCGGGTTACG CCATGTGTTC GCCTGGGCAC CGCTGCATCG CCTACACCAC ATCCGCTACG GGCGCGCCGG CGACGTCAAC TTCGCGCTGT TCTTCAGCGT CTGGGACCGC CTGCTCGGCA CCGCCCTCCA TCGTCCCGAC TACCGCCTGG ACAGCACCGA CATGGGCATC GGCGACCAGC CTGACTATCC CCGCGACTAT GCCGGCCAGT TGCTCGCGCC ATTCCGCGAC CTGCCACGCA GCAGGCACGT CCCACAGCCG CCGGAAGGAT TGGGGCGTTC AGCCGGCCAG GCGTAG
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Protein sequence | MQFFLRYAYA PLFWSGFIGL ATWQVGYRQA SHAWLVALFL GALGLSFLAE RRLPYQPRWN RPHADRLRDV LHASVNESLN ALGILALPLL AGVLSFWPVW PQAWPLWLQL LLAIVLADLG ITLVHYASHR SALLWRLHAV HHSVQRLYGF NGLMKHPLHL GLEALGGTLP LLLLGVPQTV AALLAFAIGI QLLLQHSNVD MRIGGLRHVF AWAPLHRLHH IRYGRAGDVN FALFFSVWDR LLGTALHRPD YRLDSTDMGI GDQPDYPRDY AGQLLAPFRD LPRSRHVPQP PEGLGRSAGQ A
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