Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53900 |
Symbol | |
ID | 4381666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4778779 |
End bp | 4780770 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326924 |
Product | helicase |
Protein accession | YP_792483 |
Protein GI | 116048717 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.027485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAC TGCCCGGCGA CAACGCCTGG CTGCACTTCA TGCAGGACGA TCTGCCGCGC CTGCGCCAGC AGGGCTGGTT CATCGACATC CGCGCTGACT TCGCCTACGA CCTGACGCCC ATCGACGCCT GGTACGCCGA GGTCGAGGAA GCCGACGACC GCCAGTGGTT CGAGCTGGAA CTGGGCATCC AGGTCGCCGG ACAGCGGGTC AGCCTGCTGC CGGCGCTGAC CGAGCTGATC CGCCGCAGTC CGGCCCTGCT CGATCCGCGC GCCCTCGCCC GGCACGCCGA CGAAGAGCAA CTGGTGCTGC GCCTGGAACT CAACCCGCCG CTGCGCGTGG CGCTGCCCTT CGGCCGTCTG AAGCCGGTGC TGGCGACGCT TTCCGACTTC TACCTGGGCG ACCCCGAACC GCAGCGCAAG CTGCGCCTGG GCGCACCGGA CGCGGCGCGC CTGGCCGATC TCGACGAGTT GCCGCTGGCC TGGGAAGGCG GCGACAACCT GCGCGACTTC GCCCGCCGCC TACGCAGTTT CCAGGCTCGT CCGGCGACCC CGCCGCAAGG CCTGCGCGCC GAACTGCGGC CCTACCAGCT CGAAGGCCTG AGCTGGATGC AGACCCTGCG CGAACTCGAC AGCGGCGGCG TGCTGGCCGA CGACATGGGG CTGGGCAAGA CCTTGCAGTC GCTGGCCCAC GTGCTCCTGG AAAAGCAGGC CGGGCGGCTC GACACGCCGG CGCTGGTGGT GATGCCCACC AGCCTGATCC CCAACTGGCT GGACGAGGCC GAGCGCTTCG CTCCCGATCT GCGCGTGCTG GCCCTGCACG GCGCCGGCCG GCGCCGCGAC TTCGCCCGTA TCGACGAGCA CGACCTGGTG CTGACCACCT ATGCCCTGCT GCCACGCGAC GCCGCCGAGC TGGGCAAGCG GCGGTTCCAC CTGCTGATCC TCGACGAGGC GCAGAACATC AAGAACGCCA CCACCAAGGC CGCCGTCGCC GCCCGCGAGC TGGCGGCACG GCATCGCCTG TGCCTGACCG GCACGCCGCT GGAGAACCAC CTCGGCGAAC TCTGGTCGCT GTTCCATTTC CTGATGCCCG GCTGGCTCGG CGACGCCCGC CAGTTCGCCC AGGACTACCG CACGCCGATC GAGAAGCACG GCGACGAGGC ACGCCTCAGC CACCTGGCCG CGCGCCTGCG GCCGTTCCTG CTGCGACGGA CCAAGGAACA GGTGGCCTCG GAACTGCCGC CGAAGAGCGA GTTCACCCAG TTCGTCGAAC TCAGCGAGGC GCAACGCGAA CTCTACGAGA CCGTGCGCCT GGCGCTGGAC CGCAAGGTCC GCGAGGAGAT CGCCCGGCGC GGCCTGGCGC GCAGCCGCAT CGTGATCCTC GAGGCGCTGC TCAAGCTGCG CCAGGTCTGC TGCGACACGC GCCTGCTGCA ACGCCAGGAA GACGGCGCGC GCAGCGGCCG GGCGCTCAGC TCGGGCAAGC TGGCCTACCT GCTCGACATG CTCGACGAAC TGATCGCCGA GGGTCGCCGG GTCCTGCTGT TCTCGCAGTT CACCTCGATG CTCGCGCTGA TCGAGGACGC CCTGCGCCAG CGCGGCGTCG ACTACGTCCT GCTGACCGGC GAGACCCGCG ACCGCCGCGC CCCGGTACAG CGCTTCCAGA GCGGCAAGGT GCCGGTGTTC CTGATCAGCT TGAAGGCAGG CGGGGTCGGC CTCAACCTGA CCGCGGCGGA CACCGTGATC CACTACGATC CCTGGTGGAA CCCGGCGGTG GAGAACCAGG CCAGCGACCG CGCCTACCGC ATCGGCCAGG ACAAGCCGGT GTTCGTCTAC CGGCTGATCG CCCGCGGCAC GGTGGAAGAG AAGATCCAGC ACCTGCAGCA GGAAAAGGCC GCCCTCGCCG ACGGCCTGTT CAGCGAAGGC AACGGCGACG GCTGGAAGCT TGACGAGGCC GATATCGACG CGCTGTTCGC GCCCTTGCCC AAGGCGCTCT GA
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Protein sequence | MFELPGDNAW LHFMQDDLPR LRQQGWFIDI RADFAYDLTP IDAWYAEVEE ADDRQWFELE LGIQVAGQRV SLLPALTELI RRSPALLDPR ALARHADEEQ LVLRLELNPP LRVALPFGRL KPVLATLSDF YLGDPEPQRK LRLGAPDAAR LADLDELPLA WEGGDNLRDF ARRLRSFQAR PATPPQGLRA ELRPYQLEGL SWMQTLRELD SGGVLADDMG LGKTLQSLAH VLLEKQAGRL DTPALVVMPT SLIPNWLDEA ERFAPDLRVL ALHGAGRRRD FARIDEHDLV LTTYALLPRD AAELGKRRFH LLILDEAQNI KNATTKAAVA ARELAARHRL CLTGTPLENH LGELWSLFHF LMPGWLGDAR QFAQDYRTPI EKHGDEARLS HLAARLRPFL LRRTKEQVAS ELPPKSEFTQ FVELSEAQRE LYETVRLALD RKVREEIARR GLARSRIVIL EALLKLRQVC CDTRLLQRQE DGARSGRALS SGKLAYLLDM LDELIAEGRR VLLFSQFTSM LALIEDALRQ RGVDYVLLTG ETRDRRAPVQ RFQSGKVPVF LISLKAGGVG LNLTAADTVI HYDPWWNPAV ENQASDRAYR IGQDKPVFVY RLIARGTVEE KIQHLQQEKA ALADGLFSEG NGDGWKLDEA DIDALFAPLP KAL
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