| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53150 |
|---|
| Symbol | |
|---|
| ID | 4385318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4711781 |
|---|
| End bp | 4713571 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326858 |
|---|
| Product | ATP-binding/permease fusion ABC transporter |
|---|
| Protein accession | YP_792417 |
|---|
| Protein GI | 116048783 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC GCGGAGACCG CCTGAGCTGG GCGGAGATTC GTCGACTCGC ACTGCGCCAC
AAGAAAGCCC TGTTGCTCGC CAACCTGGTG GCGGTGCTGG CCACCCTCTG CACCGTGCCG
ATCCCCTTGC TGCTGCCGTT GCTGGTGGAC GAAGTGCTGC TCGGCAAGGG CGACGGCGCG
CTGCGTTTCA TGGACCGCCT GTTGCCCGCC GACTGGCAGG TGGCGTTCGG CTACATCGGC
CTGATGCTGG CGGCGACCCT CCTGTTGCGG GGGGCGGCGC TGGTGTTCAA CGTGCTCCAG
GCGAAGCTGT TCGCGCGGCT GTCCAAGGAC ATCGTCTACC GCATCCGCCT GCGTCTGATC
GAGCGCCTCC GGCATATCGC CCTGGGCGAA TACGAAACCC TCGGCGGCGG TTCGATCAGC
GCCCACCTGG TGACCGACCT GGACACCCTG GACAAGTTCG TCGGGGAAAC CCTCAGCCGC
TTCCTGGTCG CCTTGCTGAC GCTGCTCGGC ACCGCCGCGA TCCTGGTCTG GATGCACTGG
CAGCTGGCCT TGCTGATCCT GCTGTTCAAC CCGCTGGTGA TCTGGTCCAC GGTACAACTG
GGCAAGCGCG TCAAGCACCT CAAGAAGCTC GAGAACGACA GCACCGCGCG CTTCACCCAG
GCGCTCACCG AGACCCTCGA GGCGATCCAG GAAGTCCGCG CCGGCAATCG CCAGGGCTAT
TTCCTCGGCC GCCTCGGCCA CCGCGCCCAG GAAGTCCGCG ACTACGCCGT GGCCTCGCAA
TGGAAAAGCG ACGCCGCCGG GCGCGCCAGC GGCCTGCTGT TCCAGTTCGG CATCGATGTG
TTCCGCGCCG CGGCGATGCT TACCGTGCTG CTCTCGGACC TGTCGATCGG CCAGATGCTC
GCGGTGTTCA GCTACCTCTG GTTCATGATC GGTCCGGTCG AACAGCTGCT CGGCCTGCAA
TACGCCTACT ACGCCGCTGG CGGCGCGTTG CAGCGGATCA ACGAGTTGCT GGCGCGGGCC
GACGAGCCGC GCTACCCGCC GCTGCGCGAT CCGTTCGCCG GCCGCACGAC CGTTGGCATC
GAGGTGCGCG GGCTGGATTT CGCCTACGGC GAGGACAAGG TCCTGGAGCA GTTGGACCTG
AACATCGGCG CCGGCGAGAA GGTTGCCCTG GTCGGCGCCA GCGGCGGCGG CAAGAGCACG
CTGGTGCAAC TGCTACTCGG CCTCTACAGT GCGCAGCGCG GCAGCATCCG CTACGGCGGG
GTGCCCCTGG AGGAAATCGG CCTGGACTGC GTGCGCGAAC ATGTCGCGGT GGTCCTCCAG
CATCCGGCGC TGTTCAACGA CAGCGTGCGG GCCAACCTGA CCATGGGCCG CGAACGCAGC
GACCAGGCCT GCTGGCGGGC GTTGGAGATC GCCCAGTTGG CCGACGGCGT GCGGCGCCTG
CCGCAGGGGC TGGACACCGT GGTCGGGCGT TCCGGGGTGC GCCTGTCGGG CGGTCAGCGG
CAGCGCCTGG CGATCGCCCG GATGATCCTC GCCGAGCCCA AGGTGGTGAT CCTCGACGAG
GCCACCTCGG CCCTCGACGC CGCTACCGAG TACGCCCTGC ACCAGGCGCT CGGCGACTTC
CTCGAAGGCC GCACCACATT GATCGTGGCT CATCGGCTGT CGGCGGTGAA GCAGGCCGAC
CGGGTCCTGG TCTTCGATGG CGGGCATATC GCCGAAGACG GCGACCACCA GCAACTGATC
GCCGAAGGCG GCCTCTACGC CCGGCTCTAC GGACATCTGC AACAGATGTG A
|
|---|
| Protein sequence | MSERGDRLSW AEIRRLALRH KKALLLANLV AVLATLCTVP IPLLLPLLVD EVLLGKGDGA
LRFMDRLLPA DWQVAFGYIG LMLAATLLLR GAALVFNVLQ AKLFARLSKD IVYRIRLRLI
ERLRHIALGE YETLGGGSIS AHLVTDLDTL DKFVGETLSR FLVALLTLLG TAAILVWMHW
QLALLILLFN PLVIWSTVQL GKRVKHLKKL ENDSTARFTQ ALTETLEAIQ EVRAGNRQGY
FLGRLGHRAQ EVRDYAVASQ WKSDAAGRAS GLLFQFGIDV FRAAAMLTVL LSDLSIGQML
AVFSYLWFMI GPVEQLLGLQ YAYYAAGGAL QRINELLARA DEPRYPPLRD PFAGRTTVGI
EVRGLDFAYG EDKVLEQLDL NIGAGEKVAL VGASGGGKST LVQLLLGLYS AQRGSIRYGG
VPLEEIGLDC VREHVAVVLQ HPALFNDSVR ANLTMGRERS DQACWRALEI AQLADGVRRL
PQGLDTVVGR SGVRLSGGQR QRLAIARMIL AEPKVVILDE ATSALDAATE YALHQALGDF
LEGRTTLIVA HRLSAVKQAD RVLVFDGGHI AEDGDHQQLI AEGGLYARLY GHLQQM
|
|---|
| |