Gene PA14_52900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52900 
Symbol 
ID4382858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4689061 
End bp4690221 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID639326838 
Productacyl-CoA dehydrogenase 
Protein accessionYP_792397 
Protein GI116048803 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.461273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA ACAGCGAAGA GCTGAACGCG ATCCGCGAGG GCGTACGTGC CCTCTGCGCC 
GAATTCGACG CCGCCTACTG GCGCCGCATC GACGAGCAGC GCGGTTTTCC CGAGGCCTTC
GTCAAGGCCC TGACCGACGC CGGCTGGCTC TCGGCAATGA TCCCGGAGGA GTACGGCGGT
TCCGGCCTGG GCCTGGCCGA GGCCTCGGTG ATCCTGGAGG AAGTCAACCG CTGCGGCGGC
AACTCCGGCA CCGTGCACGG GCAGATGTAC AACATGTTCA CGCTGCTGCG TAACGGCAGC
GAGGCGCAGA AGCGCTTCTA CCTGCCGAAG CTGGCCAGCG GCGAGCTGCG CCTGCAGTCG
ATGGGGGTGA CCGAGCCGAC CACCGGCACC GATACCACCA AGATCAAGAC CACCGCCGTG
CGCAAGGGCG ACCGCTATGT GATCAACGGG CAGAAGGTGT GGATCTCGCG GATCCAGCAC
TCCGACCTGA TGATCCTGCT GGCGCGCACC ACGCCGCTGG CCGAGGTGAA GCGCAAGTCC
GAAGGCATGT CGATCTTCCT CGTCGACCTG CGCGAGGCCA TCGGCAAGGG CCTGACCGTG
CAGCCGATCG CCAACATGGT CAACCACGAG ACCAACGAGC TGTTCTTCGA CAACCTGGAG
ATCCCCGCCG ATAGCCTGAT CGGTGAGGAA GGCAAGGGCT TCCGCTACAT CCTCGACGGC
CTCAATGCCG AGCGCACCCT GATCGCCGCC GAATGCATCG GCGACGGCCG CTGGTTCATC
GACAAGGCCA GCCACTATGC CCGCGACCGC GTGGTCTTCG GCCGGCCGAT AGGGCAGAAC
CAGGGCGTGC AGTTCCCCAT CGCCGAGGCG CACATCGAAG TGGAGGCCGC CGACCTGATG
CGCTGGCGCG CCTGCCAGGA GTACGACGCT GGGCTCAACG CCGGGGCCAG CGCGAACATG
GCCAAGTACC TGGCGGCGAA AGCTTCCTGG GAGGCGGCCA ACGCCTGCCT GCAGACCCAC
GGCGGCTTCG GCTTCGCCTG CGAGTACGAC GTCGAGCGCA AGTTCCGCGA GACCCGCCTG
TACCAGGTGG CGCCGATCTC CACCAACCTG ATCCTGTCCT ACGTGGCCGA GCACCTGCTC
GAACTGCCGC GCTCGTTCTG A
 
Protein sequence
MNPNSEELNA IREGVRALCA EFDAAYWRRI DEQRGFPEAF VKALTDAGWL SAMIPEEYGG 
SGLGLAEASV ILEEVNRCGG NSGTVHGQMY NMFTLLRNGS EAQKRFYLPK LASGELRLQS
MGVTEPTTGT DTTKIKTTAV RKGDRYVING QKVWISRIQH SDLMILLART TPLAEVKRKS
EGMSIFLVDL REAIGKGLTV QPIANMVNHE TNELFFDNLE IPADSLIGEE GKGFRYILDG
LNAERTLIAA ECIGDGRWFI DKASHYARDR VVFGRPIGQN QGVQFPIAEA HIEVEAADLM
RWRACQEYDA GLNAGASANM AKYLAAKASW EAANACLQTH GGFGFACEYD VERKFRETRL
YQVAPISTNL ILSYVAEHLL ELPRSF