Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52900 |
Symbol | |
ID | 4382858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4689061 |
End bp | 4690221 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326838 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_792397 |
Protein GI | 116048803 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.461273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCGA ACAGCGAAGA GCTGAACGCG ATCCGCGAGG GCGTACGTGC CCTCTGCGCC GAATTCGACG CCGCCTACTG GCGCCGCATC GACGAGCAGC GCGGTTTTCC CGAGGCCTTC GTCAAGGCCC TGACCGACGC CGGCTGGCTC TCGGCAATGA TCCCGGAGGA GTACGGCGGT TCCGGCCTGG GCCTGGCCGA GGCCTCGGTG ATCCTGGAGG AAGTCAACCG CTGCGGCGGC AACTCCGGCA CCGTGCACGG GCAGATGTAC AACATGTTCA CGCTGCTGCG TAACGGCAGC GAGGCGCAGA AGCGCTTCTA CCTGCCGAAG CTGGCCAGCG GCGAGCTGCG CCTGCAGTCG ATGGGGGTGA CCGAGCCGAC CACCGGCACC GATACCACCA AGATCAAGAC CACCGCCGTG CGCAAGGGCG ACCGCTATGT GATCAACGGG CAGAAGGTGT GGATCTCGCG GATCCAGCAC TCCGACCTGA TGATCCTGCT GGCGCGCACC ACGCCGCTGG CCGAGGTGAA GCGCAAGTCC GAAGGCATGT CGATCTTCCT CGTCGACCTG CGCGAGGCCA TCGGCAAGGG CCTGACCGTG CAGCCGATCG CCAACATGGT CAACCACGAG ACCAACGAGC TGTTCTTCGA CAACCTGGAG ATCCCCGCCG ATAGCCTGAT CGGTGAGGAA GGCAAGGGCT TCCGCTACAT CCTCGACGGC CTCAATGCCG AGCGCACCCT GATCGCCGCC GAATGCATCG GCGACGGCCG CTGGTTCATC GACAAGGCCA GCCACTATGC CCGCGACCGC GTGGTCTTCG GCCGGCCGAT AGGGCAGAAC CAGGGCGTGC AGTTCCCCAT CGCCGAGGCG CACATCGAAG TGGAGGCCGC CGACCTGATG CGCTGGCGCG CCTGCCAGGA GTACGACGCT GGGCTCAACG CCGGGGCCAG CGCGAACATG GCCAAGTACC TGGCGGCGAA AGCTTCCTGG GAGGCGGCCA ACGCCTGCCT GCAGACCCAC GGCGGCTTCG GCTTCGCCTG CGAGTACGAC GTCGAGCGCA AGTTCCGCGA GACCCGCCTG TACCAGGTGG CGCCGATCTC CACCAACCTG ATCCTGTCCT ACGTGGCCGA GCACCTGCTC GAACTGCCGC GCTCGTTCTG A
|
Protein sequence | MNPNSEELNA IREGVRALCA EFDAAYWRRI DEQRGFPEAF VKALTDAGWL SAMIPEEYGG SGLGLAEASV ILEEVNRCGG NSGTVHGQMY NMFTLLRNGS EAQKRFYLPK LASGELRLQS MGVTEPTTGT DTTKIKTTAV RKGDRYVING QKVWISRIQH SDLMILLART TPLAEVKRKS EGMSIFLVDL REAIGKGLTV QPIANMVNHE TNELFFDNLE IPADSLIGEE GKGFRYILDG LNAERTLIAA ECIGDGRWFI DKASHYARDR VVFGRPIGQN QGVQFPIAEA HIEVEAADLM RWRACQEYDA GLNAGASANM AKYLAAKASW EAANACLQTH GGFGFACEYD VERKFRETRL YQVAPISTNL ILSYVAEHLL ELPRSF
|
| |