Gene PA14_52700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52700 
SymbolaruF 
ID4385600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4671246 
End bp4672262 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID639326821 
Productarginine/ornithine succinyltransferase AI subunit 
Protein accessionYP_792380 
Protein GI116048820 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03245] arginine/ornithine succinyltransferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.6133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTGA TGCGCCCCGC CCAAGCGGCC GACCTGCCAC AGGTGCAGCG TCTGGCGGCG 
GACAGCCCGG TAGGCGTCAC GTCCTTGCCG GATGACGCCG AACGCCTGCG CGACAAGATC
CTCGCTTCCG AGGCCTCGTT CGCCGCGGAG GTAAGCTACA ACGGCGAGGA AAGCTATTTC
TTCGTCCTCG AGGACAGCGC CAGCGGCGAG CTGGTCGGCT GCTCGGCGAT CGTCGCCTCG
GCCGGGTTCT CGGAACCGTT CTACAGCTTC CGCAACGAAA CCTTCGTGCA CGCCTCGCGC
TCGCTGTCGA TCCACAACAA GATCCATGTC CTCTCGCTGT GCCACGACCT TACCGGCAAC
AGCCTGCTGA CCAGTTTCTA CGTACAGCGC GACCTGGTGC AGAGCGTCTA TGCCGAACTC
AACTCGCGCG GTCGCCTGCT GTTCATGGCC AGCCATCCGG AGCGCTTCGC CGACGCGGTG
GTGGTGGAGA TCGTCGGCTA CAGCGACGAG CAGGGCGAAT CGCCGTTCTG GAACGCGGTC
GGGCGCAACT TCTTCGACCT GAACTACATC GAGGCGGAAA AGCTCTCCGG GCTGAAGAGC
CGCACCTTCC TCGCCGAACT GATGCCGCAC TATCCGATCT ACGTGCCGCT GTTGCCGGAT
GCCGCCCAGG AATCCATGGG CCAGGTTCAC CCGCGAGCGC AGATCACCTT CGACATCCTG
ATGCGCGAAG GCTTCGAGAC CGACAACTAC ATCGACATCT TCGATGGCGG CCCGACCCTG
CACGCGCGCA CCTCGGGGAT TCGCTCGATC GCCCAGAGCC GGGTGGTTCC GGTGAAGATC
GGCGAGGCGC CGAAGAGCGG GCGTCCATAC CTGGTCACCA ACGGCCAGTT GCAGGACTTC
CGCGCGGTTG TGCTGGACCT GGACTGGGCG CCCGGCAAGC CGGTGGCCCT GAGTGTTGAA
GCCGCCGAGG CCCTGGGCGT CGGCGAAGGC GCCAGCGTGC GCCTGGTAGC GGTCTGA
 
Protein sequence
MLVMRPAQAA DLPQVQRLAA DSPVGVTSLP DDAERLRDKI LASEASFAAE VSYNGEESYF 
FVLEDSASGE LVGCSAIVAS AGFSEPFYSF RNETFVHASR SLSIHNKIHV LSLCHDLTGN
SLLTSFYVQR DLVQSVYAEL NSRGRLLFMA SHPERFADAV VVEIVGYSDE QGESPFWNAV
GRNFFDLNYI EAEKLSGLKS RTFLAELMPH YPIYVPLLPD AAQESMGQVH PRAQITFDIL
MREGFETDNY IDIFDGGPTL HARTSGIRSI AQSRVVPVKI GEAPKSGRPY LVTNGQLQDF
RAVVLDLDWA PGKPVALSVE AAEALGVGEG ASVRLVAV