| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52190 |
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| Symbol | rumA |
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| ID | 4383105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4628589 |
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| End bp | 4629941 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639326780 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_792343 |
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| Protein GI | 116048856 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.159289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAA ATAAGGGCGG GCTGCGCTTC CAGCCCAGCG GTGGTGCGCG CGGTCCCGCG
ATACCGGTAG GCAAGAAGCA GCGCCTGACC ATCGAGCGCC TGGCCCATGA CGGCCGAGGT
ATCGCCCACG AGGCGGGGAT GACCTGGTTC GTCAGCGGCG GGCTGCCTGG CGAGGAACTT
GAGGCACGGG TGCTGGGCGC GCGAAGCAAG GTGGTCGACG CGCGCAGCGA GCGCCTGTTC
AGCAGTAGCG ACCTGCGTCG CCGCGAGCCC TGCACTGTAG CGGGTCGCTG CGGCGGCTGC
ACCCTGCAGC ACCTGGAACA CGGCGAGCAG TTGGCCCTGA AGCAGCGTAC CTTGCAGGAG
CAGTTGCAGC GTTTCGCCGG GATCGAGCCG GAAGAATGGG CCGCCCCCCT GGTCGGGCCC
GAATTCGGCT ATCGGCGCCG CGCTCGGATC GCCGTGCGCT GGGATGCCAG GGCGCGGCGT
CTGGATGTCG GCTTCCGTGC CTCGGCCAGC CAGGAGATCG TCGCCTTCGA TGAGTGCCTG
GTCCTGGTGC CGCCTTTGCA AACGATTGCC CGTGCCCTGC CTGCTCTTCT GCAGGACTTC
CGCAAGCCGG AAAGCATCGG CCACGTGGAA CTCTTCCATG GCACGGCCAG TGCATTGCTG
TTGCGGCATA CGACGGCCCT GGTCGACGAG GATCGCCAGC GCCTGGCCGC TTTCTGCTCC
GCACACCAGG CCCAGCTCTG GCTGCAAGGT GCGGAACAGC CCTTGCCGGT GGAGCCGGCC
GCCGAACTGG GCTACTCCTT GGGTGACTGG CAACTGACTC TGGCGTACCG ACCCGGAGAC
TTCGTCCAGG TCAATGCGCC GGTGAACGAG TCGATGATCC GCCAGGCCCT TGACTGGCTG
GCGCCGACCG CCGACGAGCG GGTCCTCGAC CTGTTCTGCG GGCTGGGCAA TTTCTCCCTG
CCGCTGGCGC GCCGGGTGGC GCGGGTAGTC GGGGTGGAGG GCGTGGCGGC GATGGTCGAG
CGGGCAGGCG CCAACGCGCT GGCCAATGGC CTTGGCAACG CGCACTTTTT CCAGGCCGAC
CTGTCCAAAG CGCTTGCCGA AGCGCCCTGG GCGGAGCAAG GTTTTACCGC TGTGCTGCTC
GATCCGCCGC GCGACGGCGC GTTCGAGGCG GTACGCGAAA TGAGTTCTCT GGGTGCCCGG
AGGGTAGTCT ATGTATCCTG CAATCCGGCG ACCCTGGCGC GCGATGCTGG CGAAATGGCC
AGGCAGGGCT ATCGTCTGAA GCGCGCCGGA ATCCTCGATA TGTTTCCGCA GACCGCACAT
GTCGAGGCCA TGGCTTTGTT CGAGGCAGGC TAG
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| Protein sequence | MARNKGGLRF QPSGGARGPA IPVGKKQRLT IERLAHDGRG IAHEAGMTWF VSGGLPGEEL
EARVLGARSK VVDARSERLF SSSDLRRREP CTVAGRCGGC TLQHLEHGEQ LALKQRTLQE
QLQRFAGIEP EEWAAPLVGP EFGYRRRARI AVRWDARARR LDVGFRASAS QEIVAFDECL
VLVPPLQTIA RALPALLQDF RKPESIGHVE LFHGTASALL LRHTTALVDE DRQRLAAFCS
AHQAQLWLQG AEQPLPVEPA AELGYSLGDW QLTLAYRPGD FVQVNAPVNE SMIRQALDWL
APTADERVLD LFCGLGNFSL PLARRVARVV GVEGVAAMVE RAGANALANG LGNAHFFQAD
LSKALAEAPW AEQGFTAVLL DPPRDGAFEA VREMSSLGAR RVVYVSCNPA TLARDAGEMA
RQGYRLKRAG ILDMFPQTAH VEAMALFEAG
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