| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52150 |
|---|
| Symbol | lpxO2 |
|---|
| ID | 4383108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4624345 |
|---|
| End bp | 4625283 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639326777 |
|---|
| Product | lipopolysaccharide biosynthetic protein LpxO2 |
|---|
| Protein accession | YP_792340 |
|---|
| Protein GI | 116048859 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0295092 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTT CTCTCCTGGT AAAAGTCACT CTGGTGGGCC TGTTCGTCGC CAGCGTCCTG
TTCGTCCATT TCCGTGGGCG CGCGCGCTTG CCCTTCCTGC GTCAACTGGT CAACCACTCC
GCCTGGTTCG CCCCCTACAA CTCGCTGATG TACCTGTTCT CCAGCGTCCC CTCGAAGCCC
TATCTGGATC GCAGCCGTTT TCCAGAGCTG GACGAACTGA AGAACAATTG GCAAACCATC
CGCGAAGAAG CCCTCAACCT GTTCGACGAG GGTTATATCC GGGCTGCCCT GAACAACAAC
GAAGCCGGCT TCGGCTCGTT CTTCAAGAAA GGCTGGAAGC GCTTCTACCT GACCTGGTAC
GACGGCCCGC TGCCCTCCGC CCAGCAGCTC TGCCCGAAGA CCGTAGAGCT GGTGAGCCGC
ATCCCCAACG TCAAGGGCGC GATGTTCACC CTGCTTCCCG GCGGCAGCCA CCTGAATCCG
CACCGCGACC CCTTCGGCGG CTCACTGCGC TATCACCTCG GCCTGTCCAC GCCGAATTCG
GACAACTGCC GCATCTACGT CGACGGCCAG CCCTACGCGT GGCGTGATGG CGAAGACGTG
ATGTTCGACG AAACCTTCGT CCACTGGGTG AAGAACGAGA CCGAGCAGAC CCGGGTGATT
CTCTTCTGCG ATATCGAGCG GCCGCTCCGT TCCCGCCTGC TGACCCGGCT CAATCGCTGG
ATCAGCGGCA TTCTCGGGCG TGCGACCGCA CCGCAGAACG TCGAAGGCGA ACGCGTCGGC
AGCATCAACC AGGCCTACTC GGTCGCCATT CGCGGCGGCA ATGCCATCGG CGCCCAGGTG
AAGCGCTTCA AACGCGCCTA CCCGAAGGCC TACCGAGTCC TCCGCCCGGT GCTGGCGGTG
ATCCTGCTGG TCATCCTCTA TCGTTGGATC TTCGGCTGA
|
|---|
| Protein sequence | MSVSLLVKVT LVGLFVASVL FVHFRGRARL PFLRQLVNHS AWFAPYNSLM YLFSSVPSKP
YLDRSRFPEL DELKNNWQTI REEALNLFDE GYIRAALNNN EAGFGSFFKK GWKRFYLTWY
DGPLPSAQQL CPKTVELVSR IPNVKGAMFT LLPGGSHLNP HRDPFGGSLR YHLGLSTPNS
DNCRIYVDGQ PYAWRDGEDV MFDETFVHWV KNETEQTRVI LFCDIERPLR SRLLTRLNRW
ISGILGRATA PQNVEGERVG SINQAYSVAI RGGNAIGAQV KRFKRAYPKA YRVLRPVLAV
ILLVILYRWI FG
|
|---|
| |