Gene PA14_52000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52000 
Symbol 
ID4380025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4614957 
End bp4615376 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID639326764 
Producthypothetical protein 
Protein accessionYP_792327 
Protein GI116048872 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00139093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGCA AGAACAAACC GCTGCCCGAA GTAGCGTGGC TGCAGCCGCG CCTGGCGCTC 
AGCCGCGCCA TCAGCCTGGG AAGCTTCGTC GGCCTGGTCC TGCTCATCCT CATTCGCGAC
CTGATCTACG CGGACGCCCA TGGTGCGGCG AGCTGGGTGC CCTGGCTGGT CCTCGCCTTC
AAGCTGCTGC CGCTGCTGGT GGTGGCCCCC GGACTGCTCA TGGGCAGCGC GCGCGGGCAT
GCCTGGGCCT GCTACGTGGT CAACCTGTAT TTCATCCTCG GCGTACTCGC CGCCTTCGAT
CCCACGCAGC GCCTGTTCGG CTGGGCCGAA GTGCTACTCA GCGTGACCTT GTTCTGCGCC
GCGCTGCTCT ATACGCGCTG GCGATTCCAG TACGACCGAA GGGTCGCCGG GGAACGCTGA
 
Protein sequence
MARKNKPLPE VAWLQPRLAL SRAISLGSFV GLVLLILIRD LIYADAHGAA SWVPWLVLAF 
KLLPLLVVAP GLLMGSARGH AWACYVVNLY FILGVLAAFD PTQRLFGWAE VLLSVTLFCA
ALLYTRWRFQ YDRRVAGER