Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51540 |
Symbol | |
ID | 4380008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4583157 |
End bp | 4583726 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639326722 |
Product | putative transposase |
Protein accession | YP_792286 |
Protein GI | 116048913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000000532814 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000365126 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGAGGC GGCGGAGGGT CGCGGTGGCG CGCGAATGCC TGAGCCTGTC GAGCGCACCG AACCAGGTCT TGTCGATGGA TTTCGTCTTC GACGCGCTCA GCACTGGGCG ACGGATCAAA TGCCTGACGG TGGTCGATGA CTTCACCAAG GTGTCGGTCG ACATCTTGGT GGAGTACGGT ATCAGCGGTT TTCGTGTCAC GCGGGCGCTG GACGAGATGG CGCGGTTTCG TGGCTACCCG CAGGCGATCC GCACCGACCA GGGCCCCGAG TTCACCGGCA AGGCGCTTGA TCAGTGGGCC TGTCAGCGTG ACATCAAGTT GAAGCTGATT CAGCCTGGCC AGCCCACGCA GAGCGCCTTC ATCGAGTCAT TCAACGGCAA GTTCCGGGGC GAATGCCTCA ATGAGCACTG CTCGCTGGTC GAAGCCAGAA TCCGTATCGC GGCTTGGCGG GATTACAACG AGCACCGACC ACACAGCGCC ATTGGCAATC TCTCCCCGGC AGAGCTTGCT GCGAAGTGGC GAACCAACCA GCAGCAGCTG AAGCGGGAAA AGTTGATATC AACCCCATAG
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Protein sequence | MVRRRRVAVA RECLSLSSAP NQVLSMDFVF DALSTGRRIK CLTVVDDFTK VSVDILVEYG ISGFRVTRAL DEMARFRGYP QAIRTDQGPE FTGKALDQWA CQRDIKLKLI QPGQPTQSAF IESFNGKFRG ECLNEHCSLV EARIRIAAWR DYNEHRPHSA IGNLSPAELA AKWRTNQQQL KREKLISTP
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