Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51410 |
Symbol | pqsC |
ID | 4379982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4568032 |
End bp | 4569078 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326709 |
Product | PqsC |
Protein accession | YP_792273 |
Protein GI | 116048926 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000109894 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATAAGG TCAAACTGGC AGCGATCACC TGTGAACTTC CGGCTCGCAG CTACGAAAAC GACGATCCGG TGTTCGCTGC GGTACCGGAC CTCAGCGAGT CTTGGTGGCA ATTCTGGGGC GTCAATCGGC GGGGCTATTT CGACCCGCGG AACGGCGAGA ACGAGTTCAG CCTGGTGGTC CGGGCCGCCG AGCGCCTGCT GCGCAGCAGC GATACTGCGC CGGATAGCGT GGACATGCTG ATCTGTTCGG CTTCCTCGCC GATCATGACC GACGCCGGCG ATGTCCTGCC GGACCTGCGC GGGCGTCTCT ATCCGCGCAT GGCCAACGTG CTGTCCAAGC AGCTCGGCCT GAGCCGGGCG CTGCCATTGG ATTCGCAGAT GGAGTGCGCC AGCTTCCTGC TCAACCTGCG CCTGGCAGCG AGCATGATCC GCCAGGGCAA GGCCGAGAAA GTGCTGGTGG TGTGCAGCGA GTACATCTCC AACCTGCTCG ACTTCACCTC GCGTACCTCG ACCCTGTTCG CCGATGGCTG CGCGGTGGCC CTGCTGACCC GCGGCGACGA CGACAGCTGC GATCTGCTGG CTTCGGCCGA ACACAGCGAC GCCACGTTCT ATGAAGTGGC CACCGGTCGC TGGCGCCTGC CGGAAAACCC GACCGGCGAG GCCAAGCCGC GGCTGTATTT CTCGTTGTTC AGCGACGGCC AGAACAAGAT GGCCAGCTTC GTCCCGACCA ACGTGCCGAT CGCGATGCGC CGGGCGTTGG AAAAGGCCGG CCTGGGCAGC GATGACATCG ATTATTTCGT CTTCCACCAG CCAGCGCCGT TCCTGGTCAA GGCCTGGGCC GAGGGCATCG GTGCCCGTCC GGAGCAGTAC CAGCTGACGA TGGGCGATAC CGGCGTGATG ATCTCCGTTT CCATCCCGTA CACCCTGATG ACCGGCCTGC GCGAGGGCAA GATCCGCCCC GGCGATCGTA TCGTCATGGC CGGCGCAGCC ACCGGCTGGG GTTTCGCCGC CCAGGTCTGG CAATTGGGCG AGGTGCTGGT GTGCTGA
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Protein sequence | MHKVKLAAIT CELPARSYEN DDPVFAAVPD LSESWWQFWG VNRRGYFDPR NGENEFSLVV RAAERLLRSS DTAPDSVDML ICSASSPIMT DAGDVLPDLR GRLYPRMANV LSKQLGLSRA LPLDSQMECA SFLLNLRLAA SMIRQGKAEK VLVVCSEYIS NLLDFTSRTS TLFADGCAVA LLTRGDDDSC DLLASAEHSD ATFYEVATGR WRLPENPTGE AKPRLYFSLF SDGQNKMASF VPTNVPIAMR RALEKAGLGS DDIDYFVFHQ PAPFLVKAWA EGIGARPEQY QLTMGDTGVM ISVSIPYTLM TGLREGKIRP GDRIVMAGAA TGWGFAAQVW QLGEVLVC
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