Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51390 |
Symbol | pqsD |
ID | 4379983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4566976 |
End bp | 4567989 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326708 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_792272 |
Protein GI | 116048927 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000116987 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTAATC CGATCCTGGC CGGGCTGGGT TTCAGCCTGC CGAAACGCCA GGTCAGCAAT CATGACCTGG TAGGGCGCAT CAACACGTCG GATGAGTTCA TCGTTGAACG CACCGGCGTA CGCACCCGCT ATCACGTCGA GCCGGAACAG GCGGTCAGCG CGCTGATGGT ACCGGCGGCG CGCCAGGCCA TCGAGGCTGC CGGGCTGCTG CCGGAGGACA TCGACCTGTT GCTGGTGAAC ACCCTGTCGC CGGACCACCA CGACCCGTCC CAGGCCTGCC TGATCCAGCC GCTGCTGGGC CTGCGGCACA TCCCGGTGCT GGATATCCGG GCACAGTGCA GCGGGTTGCT GTACGGCTTG CAGATGGCTC GCGGGCAGAT CCTCGCCGGG CTGGCACGGC ATGTCCTGGT GGTCTGCGGC GAGGTGCTGT CCAAGCGCAT GGACTGTTCG GACCGCGGCC GCAACCTGTC GATCCTGCTC GGCGACGGTG CCGGCGCGGT GGTGGTCAGC GCCGGCGAGA GTCTCGAAGA CGGACTGCTG GACCTGCGCC TGGGCGCCGA CGGCAACTAC TTCGACCTGC TGATGACCGC GGCGCCGGGT AGTGCCTCGC CGACCTTCCT CGATGAGAAC GTCCTGCGCG AGGGCGGGGG CGAGTTCCTC ATGCGCGGCC GGCCGATGTT CGAGCATGCC AGCCAGACCC TGGTACGGAT CGCCGGCGAA ATGCTCGTGG CCCATGAGCT GACCTTGGAC GACATCGACC ATGTGATCTG CCATCAACCG AACCTGCGCA TCCTCGATGC GGTGCAGGAG CAACTGGGCA TTCCCCAGCA CAAGTTCGCG GTGACCGTGG ATCGTCTGGG CAACATGGCT TCGGCCTCGA CCCCGGTCAC GCTGGCGATG TTCTGGCCGG ACATCCAGCC CGGACAGCGG GTGCTGGTCC TGACCTACGG TTCCGGCGCG ACCTGGGGCG CGGCGCTGTA CCGTAAACCT GAGGAGGTGA ACCGGCCATG TTGA
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Protein sequence | MGNPILAGLG FSLPKRQVSN HDLVGRINTS DEFIVERTGV RTRYHVEPEQ AVSALMVPAA RQAIEAAGLL PEDIDLLLVN TLSPDHHDPS QACLIQPLLG LRHIPVLDIR AQCSGLLYGL QMARGQILAG LARHVLVVCG EVLSKRMDCS DRGRNLSILL GDGAGAVVVS AGESLEDGLL DLRLGADGNY FDLLMTAAPG SASPTFLDEN VLREGGGEFL MRGRPMFEHA SQTLVRIAGE MLVAHELTLD DIDHVICHQP NLRILDAVQE QLGIPQHKFA VTVDRLGNMA SASTPVTLAM FWPDIQPGQR VLVLTYGSGA TWGAALYRKP EEVNRPC
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