Gene PA14_50320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50320 
Symbol 
ID4380054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4472946 
End bp4473548 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID639326615 
Producthypothetical protein 
Protein accessionYP_792180 
Protein GI116049018 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0102393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000325149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCACTG CCTACTGCTT CGACCTGGAT GGAACCCTGA CCCGTCAGGA ACTGTTGCCG 
CTGATCGCGT CGTCCGTCGG TCTCGAAGAC GAGATCGAGG TGCTGACCCA GGCCACCATC
GACGGTTTCC TGCCGTTCGA CAAATCCTTC AAGCTGCGTG TCCGCTTGCT GCGCGACGCG
AACCTGGAGT GGATCCACAG CGCCCTGCGT CAGCAGGTGG AGCTGGACCC GCATATCCAG
GCGTTCATTT CCGCGCGCCC TCGGCAATGC TTCGTCGTGA CCGGCAACCT GGACCTCTGG
GTCGAGCCGG TGCTCGAACG CCTCGGAGTG CGCAGCTTCA CCTCGCGGGC GCGGATGCGC
GACGGACGTC TGGAGGGAGT CGAGGAGATC CTCCACAAGG GCGATGCGGT GACCTCCCTG
CGCGGCGAGT TCGAGCGCAT CGTCGCCGTC GGCGAAGGGA TGAACGACGT GCCGATGTTC
GAGGCCGCCG ATCTGCGCGT GGCCTACGGC GGAGTGCATG TGCCGAACCG GGTGCTGACC
GGCCTGAGCG ATTTCGTGGT CCATGAAGGA GAAGCCCTGT GTCGCCTATT GAACATGCTG
TGA
 
Protein sequence
MRTAYCFDLD GTLTRQELLP LIASSVGLED EIEVLTQATI DGFLPFDKSF KLRVRLLRDA 
NLEWIHSALR QQVELDPHIQ AFISARPRQC FVVTGNLDLW VEPVLERLGV RSFTSRARMR
DGRLEGVEEI LHKGDAVTSL RGEFERIVAV GEGMNDVPMF EAADLRVAYG GVHVPNRVLT
GLSDFVVHEG EALCRLLNML