Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50180 |
Symbol | fleR |
ID | 4380064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4458125 |
End bp | 4459546 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326605 |
Product | two-component response regulator |
Protein accession | YP_792170 |
Protein GI | 116049028 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.966541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00555849 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAGCCA AAGTCCTGCT GGTCGAAGAC GACCGCGCAC TACGCGAAGC CCTCAGCGAC ACCCTGCTGC TGGGCGGTCA CGAGTTCGTC GCCGTGGACT CGGCGGAGGC GGCGCTGCCG GTCCTGGCCC GCGAAGCCTT CAGCCTGGTG ATCAGCGACG TGAACATGCC GGGCATGGAC GGACACCAGT TGCTCGGCCT GATCCGTACG CGCTACCCGC ACCTGCCGGT GTTGCTGATG ACCGCCTACG GCGCGGTCGA TCGCGCCGTC GAGGCGATGC GCCAGGGCGC CGCCGACTAC CTGGTCAAGC CGTTCGAGGC GCGGGCGCTG CTCGACCTGG TGGCACGCCA TGCGCTGGGC CAGTTGCCGG GCAGCGAGGA GGATGGTCCG GTGGCCCTGG AGCCGGCCAG CCGGCAGTTG CTGGAACTGG CCGCGCGGGT CGCGCGCAGC GATTCCACCG TGCTGATCTC CGGCGAGTCC GGGACCGGCA AGGAAGTCCT GGCCAACTAT ATCCACCAGC AATCGCCGCG TGCCGGCAAG CCGTTCATCG CGATCAACTG TGCGGCGATC CCGGACAACA TGCTCGAGGC CACCCTGTTC GGCCACGAGA AAGGTTCCTT CACCGGCGCC ATTGCCGCCC AGCCCGGCAA GTTCGAGCTG GCCGACGGCG GCACCATTCT TCTCGACGAG ATATCGGAAA TGCCCCTCGG CCTGCAGGCC AAGTTGCTGC GCGTATTGCA GGAGCGCGAG GTGGAGCGGG TCGGTGCGCG CAAGCCGATC AACCTGGATA TCCGCGTGCT TGCCACGACC AACCGCGACC TCGCGGCGGA AGTCGCGGCG GGGCGTTTCC GCGAGGACCT CTACTATCGC CTGTCGGTCT TCCCGCTGGC CTGGCGGCCG CTGCGCGAAC GCCCTGCGGA CATCCTGCCG CTGGCCGAGC GTCTGCTGCG CAAGCACAGC CGCAAGATGA ACCTCGGCGC GGTGGCGCTC GGCCCCGAGG CCGCCCAGTG CCTGGTCCGG CATGCCTGGC CGGGCAACGT ACGGGAACTC GACAACGCCA TCCAGCGTGC GTTGATCCTG CAACAGGGCG GCCTGATCCA GCCCGCCGAC CTGTGCCTCA CCGCGCCGAT CGGCATGCCG CTCGCGGCCC CGGTGCCGGT GCCCATGCCG GCAATGCCAC CGGCCACCCC GCCGAGCGTC GAGATTCCGT CGCCGGCCGC AGGCCAGGAC GCTAGCGGCG CGCTGGGCGA CGACCTGCGC CGCCGCGAAT TCCAGGTGAT CATCGATACC CTGCGCACCG AGCGCGGCCG CCGCAAGGAG GCTGCCGAGC GCCTTGGTAT CAGCCCACGG ACCCTGCGCT ACAAGCTCGC CCAGATGCGC GACGCGGGGA TGGACGTGGA GGCCTATCTC TACGCCATCT GA
|
Protein sequence | MAAKVLLVED DRALREALSD TLLLGGHEFV AVDSAEAALP VLAREAFSLV ISDVNMPGMD GHQLLGLIRT RYPHLPVLLM TAYGAVDRAV EAMRQGAADY LVKPFEARAL LDLVARHALG QLPGSEEDGP VALEPASRQL LELAARVARS DSTVLISGES GTGKEVLANY IHQQSPRAGK PFIAINCAAI PDNMLEATLF GHEKGSFTGA IAAQPGKFEL ADGGTILLDE ISEMPLGLQA KLLRVLQERE VERVGARKPI NLDIRVLATT NRDLAAEVAA GRFREDLYYR LSVFPLAWRP LRERPADILP LAERLLRKHS RKMNLGAVAL GPEAAQCLVR HAWPGNVREL DNAIQRALIL QQGGLIQPAD LCLTAPIGMP LAAPVPVPMP AMPPATPPSV EIPSPAAGQD ASGALGDDLR RREFQVIIDT LRTERGRRKE AAERLGISPR TLRYKLAQMR DAGMDVEAYL YAI
|
| |