| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48630 |
|---|
| Symbol | |
|---|
| ID | 4380156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4324972 |
|---|
| End bp | 4326201 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326473 |
|---|
| Product | putative MFS transporter |
|---|
| Protein accession | YP_792038 |
|---|
| Protein GI | 116049160 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0171421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0121812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA ACACCTTCAG CGTGCAACGC TTCCGCGCCC TGCCGACGGA AATTCACGTG
ATGCTCGTCG GTACGCTGCT GACCCGCGGC GCCTACTTCA TGGTCTGGCC GTTCCTGGCA
CTGCTGCTGT GGCGCGAGTT CCGGCTGTCC GCCAGCGCCA TCGGCCTGCT GCTGGCGCTG
GCGACCGTCT GCGGCGCGCT CAGCGGCATC TACACCGGCT GGCTGTCGGA TCGTTTCGGG
CGCAAGCGCC TGATCTTCTT CGGCACCAGT CTCAGCGGAC TTTCCTTCGT GTTGCTGGGC
TTCAGCGGCC AGCCGCTGTC CTACGGACTG GCGATCTCCG GGGTGAGCAT CGGCTGCGCC
CTGCTCGAAT CGAGCTGCAA GGCGCTGATC GGCGACCGCG TCGAGGATCG CCGCTCGCGG
GAACTGGCGC TCTACTGCCG GTACTTCCTG ATCAACCTGG GCGCCGCCCT CGGCCCGCTG
ATCGGCCTGA CCCTCGGCGT CGCCGCCCAG GCCGGCACCT TCCTGGTCAC CGCGCTGGTC
TACTTCTGCT ACGGCCTGCT GCTCTGGCGC CTGCTGCACC ACCTCGAACT GAAGCGGCGC
AGCCTTGCCC CGCGATCCTC GACCGGGTTC CTCGAAGCCT GCCTGAGCAT GGCCCGGCAT
CGCGCCTTCA CCCTGCTGTT GCTGTGCAAC ATGCTGGCCG CGCTGATCTA CGCCACCTTC
GATTCGACCC TCGTGCAGTA CCTCACCCGC AGCGGTCTGC CCGACGTGGT CAACAGCATC
GCCCTGCTGG TGACCATCAA CGCGCTGACC ATAGTGGTCG CCCAGTTTCC CCTCCTCCGC
CTGCTGGAAA ACACCGGCAC CGGCGGCCGC CTGATGCTCG GCATGCTGCT CATGCTCCTG
GCCCAGCTAG GCTTCGCCTG GACCCCGGTG ACCCTGTTCG CCGGCCTGGC GCTGGCCACG
GTGGTGCTCA GCCTCGGCGA ACTGATCGTG TTCCCGACCT TCAGCGTGGA GGTCGACCAA
CTGACCCCCG ACGACTTGCG CGGCAGCTAT TTCGGCGCGG CCAATCTCTA CAGCCTCGGC
ACCGCGCTGG CACCGCTGTA CGGCGGGATC ATGCTCGACC ATGCCGGCAG CCAGGCGCTG
TACCTCGGCC TGGCCGCGCT GTGCGGGGTG ATCATGCTGC TGCAGGTCGG CGCAGTCGGC
CTGCGCCAGG CCGAGCGGGC CGGCGGATGA
|
|---|
| Protein sequence | MSDNTFSVQR FRALPTEIHV MLVGTLLTRG AYFMVWPFLA LLLWREFRLS ASAIGLLLAL
ATVCGALSGI YTGWLSDRFG RKRLIFFGTS LSGLSFVLLG FSGQPLSYGL AISGVSIGCA
LLESSCKALI GDRVEDRRSR ELALYCRYFL INLGAALGPL IGLTLGVAAQ AGTFLVTALV
YFCYGLLLWR LLHHLELKRR SLAPRSSTGF LEACLSMARH RAFTLLLLCN MLAALIYATF
DSTLVQYLTR SGLPDVVNSI ALLVTINALT IVVAQFPLLR LLENTGTGGR LMLGMLLMLL
AQLGFAWTPV TLFAGLALAT VVLSLGELIV FPTFSVEVDQ LTPDDLRGSY FGAANLYSLG
TALAPLYGGI MLDHAGSQAL YLGLAALCGV IMLLQVGAVG LRQAERAGG
|
|---|
| |