Gene PA14_48420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48420 
Symbol 
ID4385802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4305443 
End bp4306051 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID639326455 
Productputative transcriptional regulator 
Protein accessionYP_792020 
Protein GI116049178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0011363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.230392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGC ACTCCCCAGA CGACCCGTCG CCACGCCGCC GCCTGTCCCG CGACGAGCGC 
CAGCGCCAGT TGCTCGAGGT GGCCTGGCGG CTGGTCCGCG AAGAAGGCAC CGAGGCGCTG
ACCCTCGGTC GCCTGGCCGA GCAGGCCGGG GTGACCAAGC CGGTGGTCTA TGACCACTTC
GGCACCCGCG CCGGCCTGCT GGCGGCGCTC TACCAGGATT ACGACCTGCG CCAGACGGCG
CTGATGGAGG CTGCCCTGGA AGCGAGCGAG GCGACCCTGG AGGGGCGCGC TGACGTCATC
GCCCGCGCCT ATGTCGACTG CGTGATGCAA CAAGGCCGGG AGATTCCCGG GGTGGTCGCG
GCCCTCGCCA GCTCGCCGGA GCTGGAGCGG ATCAAGCGCG ACTACGAGGT TCTCTTCATG
GACAAGTGCC GCGCCGTGCT GGAGCCCTTC GCCGGCGGCG GACGGCTGAC CGTCGCCGCT
CTGCGCGCAA TGATCGGCGC CGCCGAAGCG CTGTCGCACG CGGCCGCCAC CGAAGAGATC
GCCCCGGAAG AGGCGCGGCG GGAACTGTAC GAGGCGATCG TGGCGATGGT CGCGCGGAGT
CGTCGGTGA
 
Protein sequence
MSMHSPDDPS PRRRLSRDER QRQLLEVAWR LVREEGTEAL TLGRLAEQAG VTKPVVYDHF 
GTRAGLLAAL YQDYDLRQTA LMEAALEASE ATLEGRADVI ARAYVDCVMQ QGREIPGVVA
ALASSPELER IKRDYEVLFM DKCRAVLEPF AGGGRLTVAA LRAMIGAAEA LSHAAATEEI
APEEARRELY EAIVAMVARS RR