Gene PA14_47840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47840 
Symbol 
ID4384688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4256213 
End bp4257157 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID639326412 
Producthypothetical protein 
Protein accessionYP_791977 
Protein GI116049220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000281004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA TCCGCATCAT CGATTCGCAT ACCGGCGGCG AGCCCACCCG CCTGGTCATC 
GGCGGCTTTC CCGATCTCGG CCACGGCGAC ATGGCTGAGC GCCGGCGCCT GCTCGGCGAG
CGCCACGACG CCTGGCGCGC CGCCTGCATC CTCGAACCGC GCGGCAGCGA CGTACTGGTC
GGCGCCCTGC TCTGCGCACC GGTCGATCCC GAAGCCTGTG CCGGAGTGAT CTTCTTCAAC
AACAGTGGCT ACCTCGGCAT GTGCGGCCAC GGCACCATCG GCCTGGTCGC CTCGCTGGCA
CACCTCGGGC GGATCGGTCC CGGCGTGCAC CGCATCGAGA CGCCGGTCGG CGAGGTCGAG
GCGACCCTCC ACGAGGACGG CTCGGTCAGC GTGCGCAACG TGCCGGCCTA CCGCTACCGT
CGCCAGGTCA GCGTCGAAGT GCCCGGCATC GGCCGGGTCA GCGGCGACAT CGCCTGGGGC
GGCAACTGGT TCTTCCTGGT CGCCGGACAC GGCCAGCGCC TCGCCGGCGA CAACCTCGAC
GCCCTCACCG CCTACACCGT CGCCGTCCAG CAGGCGCTGG ACGACCAGGA CATCCGCGGC
GAGGACGGCG GCGCCATCGA TCACATCGAA CTGTTCGCCG ACGACCCCCA CGCCGACAGC
CGCAACTTCG TGCTCTGCCC CGGCAAGGCC TACGACCGCT CGCCCTGCGG CACCGGCACC
AGTGCCAAGC TGGCCTGCCT GGCCGCCGAC GGCAAGCTGC TGCCCGGCCA GCCCTGGCGC
CAGGCGAGCG TGATCGGCAG CCAGTTCGAG GGGCGTTACG AATGGCTCGA CGGCCAGCCC
GGCGGGCGTA TCGTGCCGAC CATCCGCGGC CGCGCCCACG TCAGCGCGGA AGCCACCCTG
CTGCTGGCGG ACGACGATCC GTTCGCCTGG GGCATCCGCC GGTGA
 
Protein sequence
MQRIRIIDSH TGGEPTRLVI GGFPDLGHGD MAERRRLLGE RHDAWRAACI LEPRGSDVLV 
GALLCAPVDP EACAGVIFFN NSGYLGMCGH GTIGLVASLA HLGRIGPGVH RIETPVGEVE
ATLHEDGSVS VRNVPAYRYR RQVSVEVPGI GRVSGDIAWG GNWFFLVAGH GQRLAGDNLD
ALTAYTVAVQ QALDDQDIRG EDGGAIDHIE LFADDPHADS RNFVLCPGKA YDRSPCGTGT
SAKLACLAAD GKLLPGQPWR QASVIGSQFE GRYEWLDGQP GGRIVPTIRG RAHVSAEATL
LLADDDPFAW GIRR