| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_47340 |
|---|
| Symbol | |
|---|
| ID | 4381778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4216673 |
|---|
| End bp | 4217134 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639326374 |
|---|
| Product | putative HIT family protein |
|---|
| Protein accession | YP_791939 |
|---|
| Protein GI | 116049258 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAT TTCCCATGGA TTGCGTGTTC TGCGCCATAG CGGGTGGCCG CGAGCCGGCG
CACAGACTCT TCGAGGACGA GCATTTCATC GTCCTGCTGG ACATCTTTCC GCTGCGACCG
GCGCACGTGC TGATCGTAGC CCGCGAGCAC GCCCCGCACC TGAGCGATCT TTCCGCCGCC
GCCCGCGACG CCCTCCCGGC GCTCGCCGAG CGTACCGGTC GCGCATTGCG CCGGGCCGGT
TTCGGCGTGG AAGGCATCAA CCTGTTGCTC AACGATGGCG TGGCGGCCAA CCAGCACGTG
GCGCACCTGC ATCTGCACCT GATTCCCCGG CGTCGCGGCG ACCTGCCGCG ACTGCTCTGG
CGCGCCCTGA CCCGTTTCCT GCCGGTTGGT CGCGCGAGCC TGCAGGCGCG TCTGCAGCGG
GAAGGAGAAC TACTACGTAC AGCCTTGCTC AGGGAGGTTT GA
|
|---|
| Protein sequence | MSGFPMDCVF CAIAGGREPA HRLFEDEHFI VLLDIFPLRP AHVLIVAREH APHLSDLSAA
ARDALPALAE RTGRALRRAG FGVEGINLLL NDGVAANQHV AHLHLHLIPR RRGDLPRLLW
RALTRFLPVG RASLQARLQR EGELLRTALL REV
|
|---|
| |