Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46370 |
Symbol | |
ID | 4382327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4125450 |
End bp | 4127072 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326290 |
Product | putative two-component sensor |
Protein accession | YP_791855 |
Protein GI | 116049342 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.304755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00684988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTCG AGAAGAATAC CGAGCTGGAC CAGGCCAACC TGCGACTGAT CGTGGCCACC TGCGCGATTC TCTACGTGGT GCTGATCGGC CTGCTGCCCG GCCTGAAGGT CGAGACCTAC CTGCCGATCG TTGCCTACTA CGGCCTGTTC CTGATCGCCT CCATACTGCT GCGCCAGGCC ATCGTGCGCT GGCCGGGGCA CTACCCGGCG CGGCGGATCT TCTGCATGCT GCACGACTAC GCCGGCACCT CGTTCGGCCT GATCGTGGGC GGCGAGGCGG CGCTGCCGCT GTACGCGGTG ATGGTCTGGA TCAACCTGGG CAACGGCATG CGCTACGGCT CGCGCTACCT GGCCATCGCC ACCGCCCTGG CGCTGCTCGC GCTACTGGTC ATCTATCGCC TGACCCCGGC CTGGCAGGCT CAGCCGTTCA TGGTGCTGAT GCTGATGACC ACCAGCACCG TCATTCCCTT CTACGCGCAC CTCCTGCTGG AGCGCACGCG CAAGGCCACC GAGGAAGCGT TGCAGGCGAA CCAGGAGAAA TCGCGCCTGC TGGCCCAGGC CAGCCACGAC CTGCGCCAGC CGATCCACTC CATCGGCCTG TTCACCGCCT GCCTGCGCGA CGCCCGCCTG GGCGACGAGG AACGGCGCCT GGTGGACAAC ATCGACCGCT CGCTGCTCAA CGTCTCGCAA CTGTTCCGCT CCATCCTCGA TCTCTACACC CTCGACAACG GCCGGCTCCA GCCCAAGCAG GAGAACGTCC ACCTGGGCGA GTTGCTGCGC GACCTGGTCC GGCGCAACGC CGAGGCGGCG CGCTGGGCCG GGGTGGAGTT GCGCCTGCGC CCTTGCCGCC TGTGGACGCG AACCGATCCG GGGCTGCTGT CGACCATGCT GCAGAACCTG CTCTCCAATA GCCTCAAGTA CGCCGCCGAG CGCCCGCTGC TGATCGGCGT GCGGCGGCGA GGCGACGGCC TGGCCGTAGC CATCTACGAC CAGGGCCGGG GGATCGCGGA GGAACACCTG CCGCGGGTGT TCGAGGAGTT CTACCGGGTA CGCGAGACGC GCGACCGCGA CGTCGAGGGA ATCGGCCTGG GGCTGTCCAT CGTCCGCCGC CTGGGGCAGT TGACCGGGAT CGAGGTGACG CTGCGCTCGC GGGTCGGACG CGGCACCGCG GTGACCCTGC ACGGCCTGCC GGCAGTCGCC GCGCAAGCCC TGCCCCGCCG CGACGATCCC CTGCAGGCCG GCCTGCTCAC CGGCTTGCGG GTGTGCCTGG TGGAAGATGA TCGCAACGTC CTGCGCGCCA CCTCGGCGTT GCTCGAACGC TGGGGCTGCA CGGTCCAGGC GGAAACCGAG GCGGACGGCT GGCGAACCGA TTGCGACATA CTCGTCGTCG ACTACGACCT CGGCCCCCAC GCCTCCGGCG TCGAGTGCAT CGAGCGGGTA CGGCGGCAAC GCGGAGAGGC GATACCGGCG CTGGTGATCA GCGGCCACGA CATCGAGCGT ATCCAGGCCA GCGTCGAAGA CACCGACATC GCCCTGCTCT CCAAGCCCGT GCGCCCCACG GAATTGCGCG CCACCCTGCG CGCCCTGCGC GAGCGCCCGG AGGCCGCCAG CCACGCTTCC TGA
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Protein sequence | MKFEKNTELD QANLRLIVAT CAILYVVLIG LLPGLKVETY LPIVAYYGLF LIASILLRQA IVRWPGHYPA RRIFCMLHDY AGTSFGLIVG GEAALPLYAV MVWINLGNGM RYGSRYLAIA TALALLALLV IYRLTPAWQA QPFMVLMLMT TSTVIPFYAH LLLERTRKAT EEALQANQEK SRLLAQASHD LRQPIHSIGL FTACLRDARL GDEERRLVDN IDRSLLNVSQ LFRSILDLYT LDNGRLQPKQ ENVHLGELLR DLVRRNAEAA RWAGVELRLR PCRLWTRTDP GLLSTMLQNL LSNSLKYAAE RPLLIGVRRR GDGLAVAIYD QGRGIAEEHL PRVFEEFYRV RETRDRDVEG IGLGLSIVRR LGQLTGIEVT LRSRVGRGTA VTLHGLPAVA AQALPRRDDP LQAGLLTGLR VCLVEDDRNV LRATSALLER WGCTVQAETE ADGWRTDCDI LVVDYDLGPH ASGVECIERV RRQRGEAIPA LVISGHDIER IQASVEDTDI ALLSKPVRPT ELRATLRALR ERPEAASHAS
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