| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_45940 |
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| Symbol | lasI |
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| ID | 4382866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4084370 |
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| End bp | 4084975 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639326255 |
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| Product | autoinducer synthesis protein LasI |
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| Protein accession | YP_791820 |
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| Protein GI | 116049377 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGTAC AAATTGGTCG GCGCGAAGAG TTCGATAAAA AACTGCTGGG CGAGATGCAC
AAGTTGCGTG CTCAAGTGTT CAAGGAGCGC AAAGGCTGGG ACGTTAGTGT CATCGACGAG
ATGGAAATCG ATGGTTATGA CGCACTCAGT CCTTATTACA TGTTGATCCA GGAAGATACT
CCTGAAGCCC AGGTTTTCGG TTGCTGGCGA ATTCTCGATA CCACTGGCCC CTACATGCTG
AAGAACACCT TCCCGGAGCT TCTGCACGGC AAGGAAGCGC CTTGCTCGCC GCACATCTGG
GAACTCAGCC GTTTCGCCAT CAACTCTGGA CAGAAAGGCT CGCTGGGCTT TTCCGACTGT
ACGCTGGAGG CGATGCGCGC GCTGGCCCGC TACAGCCTGC AGAACGACAT CCAGACGCTG
GTGACGGTAA CCACCGTAGG GGTGGAGAAG ATGATGATCC GTGCCGGCCT GGACGTATCG
CGCTTCGGTC CGCACCTGAA GATCGGCATC GAGCGCGCGG TGGCCTTGCG CATCGAACTC
AATGCCAAGA CCCAGATCGC GCTTTACGGG GGAGTGCTGG TGGAACAGCG ACTGGCGGTT
TCATGA
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| Protein sequence | MIVQIGRREE FDKKLLGEMH KLRAQVFKER KGWDVSVIDE MEIDGYDALS PYYMLIQEDT
PEAQVFGCWR ILDTTGPYML KNTFPELLHG KEAPCSPHIW ELSRFAINSG QKGSLGFSDC
TLEAMRALAR YSLQNDIQTL VTVTTVGVEK MMIRAGLDVS RFGPHLKIGI ERAVALRIEL
NAKTQIALYG GVLVEQRLAV S
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