Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42970 |
Symbol | |
ID | 4382925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3819909 |
End bp | 3821420 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326018 |
Product | putative transcriptional regulator |
Protein accession | YP_791583 |
Protein GI | 116049612 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.076623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.105875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAGCC GCGTACCGCA ACCCCTGGCC TTCGCCGAAG CCCTGCTCGC TCAGTTCGGC GCGCTGTCGC GGGAAACCGA CATCGCGGCC CTGCTGGGCG GTTTCGCACG CGCAGTCGGC GAACTCAGCG GCTGCGAGCT GAGCCAGCTG TATCTGCTCG ACCAGACCCA TACCGCGCTC ACCCTCAACG CCGAATGCCG GGACGGCCTG TTGCAGGCGC TGGAGCCGTC GAGCCTGCCG GCGGACTACA CCGGCGAGCA GTTGCTGCAG TTCGCCCTGT GCCAGAACCG CGTGGTCAGT CTCGTCGACC TGCCGTCGCG GCTGCACGAG ACCGGCTTCC TGCCGGCAGG GGAGCAGCCC TGGCTGTCCC TGCTCTGCGT TCCGCTGGTG AGCCCGGAGA AAACGGTCGA GGGCATGGTG GTCTGCGCCA CCCGGCGCCC ACTGGACCTG CAGGGATTCG CCCATCCACT GGGCCAGTTG GGCTCGTTCG TGCTGGCCCA GCTGCATCTG CTGCAACGCC TCTCGCAACC CTCCGGCGAG CCGCAGGGAC CGTCCAGCGC GCCGGTGGTC AGCGGCTACG GGCTGATCGG CAGGAGCGCG GCGATGCGTG AGACCTGCCG CCTGATCAGC AAGGTCCTGC ACAACCCCTA TACCGTGTTG CTGCAGGGCG AGACCGGTAC CGGCAAGGAG GTGGTCGCAC GGGCGATCCA CGAGTACGGC CCGCGGCGAG CACAGGCGTT CGTGGTGCAG AACTGCGCGG CGTTTCCGGA AAACCTGCTG GAAAGCGAGC TGTTCGGCTA CCGCAAGGGC GCCTTTACCG GTGCCGAGCG CGATCGTCCC GGGTTGTTCG ATGCCGCGGA TGGCGGAACC CTGCTGCTCG ACGAAATCGG CGACATGCCC CTGTCGCTCC AGGCCAAGCT GTTGCGCGTG TTGCAGGAAG GCGAGATTCG CCCGCTCGGC GGCAACGACA CGCACAAGGT CGATGTACGC ATCATCGCCG CTACCCACCG TGACCTCGCC CTGCTGGTCC GCGATGGCAA GTTCCGCGAA GACCTCTACT ACCGGCTGGC GCAGTTTCCC ATCGAGTTGC CGCCGTTGCG CCAGCGCGAG GGCGACGCCC TCGAACTGGC CCGGCATTTC GCCGAACGCG CCTGCGTGTT CCTGCGCCGC GCGCCGCTGG GCTGGTCCGC GGAAGCGCTG GAACTGCTCG ACGGCTATGG CTTTCCCGGC AACGTTCGGG AGCTGAAGGG ACTGGTGGAA TGCGCGGTAC TGCTCTGCGA AGGCGATGTG CTGCTGGCCG AACACTTTTC CCTGCGCGCG CCCCCGGAAG CGGAGGCGCC GCTCAAGCTG CGCGAGCACC TGGAGCAGAT CGAGCGCGAC CTGCTGCTCG CCTGCCTGCG CAGGAACGCT GGCAACCAGA CCCTCGCCGC GCGCGAACTG GGTCTGCCGC GCCGAACCCT GATCTATCGC ATGGGACGCC TGAACATTCA TTTCGGCGAT CCCCGGACCT GA
|
Protein sequence | MFSRVPQPLA FAEALLAQFG ALSRETDIAA LLGGFARAVG ELSGCELSQL YLLDQTHTAL TLNAECRDGL LQALEPSSLP ADYTGEQLLQ FALCQNRVVS LVDLPSRLHE TGFLPAGEQP WLSLLCVPLV SPEKTVEGMV VCATRRPLDL QGFAHPLGQL GSFVLAQLHL LQRLSQPSGE PQGPSSAPVV SGYGLIGRSA AMRETCRLIS KVLHNPYTVL LQGETGTGKE VVARAIHEYG PRRAQAFVVQ NCAAFPENLL ESELFGYRKG AFTGAERDRP GLFDAADGGT LLLDEIGDMP LSLQAKLLRV LQEGEIRPLG GNDTHKVDVR IIAATHRDLA LLVRDGKFRE DLYYRLAQFP IELPPLRQRE GDALELARHF AERACVFLRR APLGWSAEAL ELLDGYGFPG NVRELKGLVE CAVLLCEGDV LLAEHFSLRA PPEAEAPLKL REHLEQIERD LLLACLRRNA GNQTLAAREL GLPRRTLIYR MGRLNIHFGD PRT
|
| |