| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42640 |
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| Symbol | pscT |
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| ID | 4381420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3792510 |
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| End bp | 3793298 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325989 |
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| Product | translocation protein in type III secretion |
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| Protein accession | YP_791554 |
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| Protein GI | 116049641 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.837601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTCC AGGACCTGCA GCAACTGCTG CTGACCTACA GCCTGCTGCT GCCGCGGATC
ATCAGTTGCT TCGTGGTCCT GCCGGTGCTG GCCAAGCAGA CCCTGGGCGG CGGCCTGGTG
CGCAACGGCG TGGCCTGCTC GCTGGCGCTG TTCGCCTACC CGATCGTCGC CGGCAGCCTG
CCGCCGGCCC TCGGCGCGCT GGACATCGCC CTGCTGATCG GCAAGGAAGT GCTGCTCGGC
CTGCTCATCG GCTTCGTCGC CACCATTCCC TTCTGGGCCA TGGAAGCGAC CGGCTTCATC
ATCGACAACC AGCGTGGCGC GGCACTCGCC TCGACCCTCA ACCCCAGCCT GGGCAGCCAG
ACCAGCCCCA CCGGGCTGTT GCTGACGCAG ACGCTGATCA CCCTGTTCTT CTCCGGCGGC
GCCTTCCTCG CGCTGGTCGG CTCGCTGTTC AGGAGCTATG CCAGTTGGCC GGTGAGCAGT
TTCTTCCCGC AGTTCGGCAG CCAATGGGTG GCATTCTTCT ACGCGCAGTT CTCGCAGATG
CTGATGCTCT GCGCGCTGTT CGCCGCGCCG CTGCTGATCG CCATGTTCCT CGCCGAGTTC
GGCCTGGCGC TGGTCAGCCG CTTCGCCCCG TCGCTGAACG TGTTCATCCT CGCCATGCCG
ATCAAGAGCC TGGTCGCCAG CCTGCTGCTG GTGCTCTACC TGGGCATCCT CATGGAGCAC
GCCTACGATG CCCTGCTGCT CGCCGTCGAC CCGCTGCGCC TGCTGCGTCC CGTGCTGGAG
ACGCCATGA
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| Protein sequence | MSVQDLQQLL LTYSLLLPRI ISCFVVLPVL AKQTLGGGLV RNGVACSLAL FAYPIVAGSL
PPALGALDIA LLIGKEVLLG LLIGFVATIP FWAMEATGFI IDNQRGAALA STLNPSLGSQ
TSPTGLLLTQ TLITLFFSGG AFLALVGSLF RSYASWPVSS FFPQFGSQWV AFFYAQFSQM
LMLCALFAAP LLIAMFLAEF GLALVSRFAP SLNVFILAMP IKSLVASLLL VLYLGILMEH
AYDALLLAVD PLRLLRPVLE TP
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