| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42440 |
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| Symbol | popD |
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| ID | 4380207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3779064 |
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| End bp | 3779951 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325971 |
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| Product | translocator outer membrane protein PopD precursor |
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| Protein accession | YP_791536 |
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| Protein GI | 116049659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATA CGCAATATTC CCTGGCGGCT ACCCAGGCCG CGATCCCCTC CGAGCCGATC
GCTCCCGGCG CCGCCGGGCG TTCCGTCGGC ACGCCGCAAG CGGCTGCGGA GCTGCCGCAG
GTGCCGGCCG CGCGGGCCGA CCGGGTCGAA CTGAACGCTC CGCGCCAGGT GCTCGACCCG
GTGCGCATGG AAGCGGCCGG CAGCGAGCTG GACAGCAGCG TCGAGCTTCT GCTGATTCTC
TTCCGCATCG CGCAGAAGGC GCGCGAGCTG GGCGTGCTCC AGCGCGACAA CGAGAACCAG
GCGATCATCC ACGCGCAGAA GGCGCAGGTG GACGAGATGC GCAGCGGCGC CACGCTGATG
ATCGCCATGG CGGTGATCGC CGGCGTCGGC GCGTTGGCCT CGGCAGTGGT CGGCAGTCTC
GGCGCGTTGA AGAACGGCAA GGCCATCAGC CAGGAGAAGA CCCTGCAGAA GAACATCGAT
GGGCGCAACG AACTGATCGA CGCGAAGATG CAGGCGCTGG GCAAGACCTC CGATGAGGAT
CGCAAGATCG TCGGCAAGGT CTGGGCGGCG GACCAGGCGC AGGACAGTGT GGCGTTGCGC
GCGGCGGGCC GTGCCTTCGA GAGCCGCAAC GGCGCCCTGC AGGTGGCCAA CACGGTGATC
CAGTCCTTCG TCCAGATGGC CAACGCCTCG GTCCAGGTGC GCCAGGGCGA GTCGCAGGCG
AGCGCCCGGG AAGAGGAGGT CAACGCCACC ATCGGGCAGA GCCAGAAGCA GAAGGTCGAG
GACCAGATGA GCTTCGATGC CGGCTTCATG AAGGACGTCC TGCAGCTCAT CCAGCAGTAC
ACCCAGAGCC ATAACCAGGC CTGGCGTGCG GCGGCCGGAG TGGTCTGA
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| Protein sequence | MIDTQYSLAA TQAAIPSEPI APGAAGRSVG TPQAAAELPQ VPAARADRVE LNAPRQVLDP
VRMEAAGSEL DSSVELLLIL FRIAQKAREL GVLQRDNENQ AIIHAQKAQV DEMRSGATLM
IAMAVIAGVG ALASAVVGSL GALKNGKAIS QEKTLQKNID GRNELIDAKM QALGKTSDED
RKIVGKVWAA DQAQDSVALR AAGRAFESRN GALQVANTVI QSFVQMANAS VQVRQGESQA
SAREEEVNAT IGQSQKQKVE DQMSFDAGFM KDVLQLIQQY TQSHNQAWRA AAGVV
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