Gene PA14_41490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_41490 
SymbolnasT 
ID4382890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3701042 
End bp3701620 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID639325895 
Producthypothetical protein 
Protein accessionYP_791460 
Protein GI116049733 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTA TCCTGCTGAT CGACGACACG CCGAAGAAAG TCGGACGCCT CAGGGCCGCC 
CTGCTCGAGA GCGGTTTCGA AGTGGTGGAC GAGTCGGGGC TGACCATCGA CCTGCCGGCG
CGCGTCGAAG CGCTGCGTCC CGACGTGATC CTGATCGACA CGGAGTCTCC CGGCCGCGAC
GTGATGGAGC AGGTCTGCCT GGTCAGCCGC GACCAGCCGC GCCCGATCGT GATGTTCACC
GACGAGCACG ATCCGGGAGT GATGCGCCGC GCCATCCAGT CCGGGGTCAG CGCCTACATC
GTCGAAGGCA TCCAGGCCAG CCGCCTGCAA CCGATCCTCG ACGTGGCCAT GGCGCGCTTC
GAGAGCGACC AGGCGCTGCG CGCTCAACTG CAGGCGCGCG AGGCGCAGCT GGCCGAGCGC
AAGCGCATCG AGCTGGCCAA GGGCCTGCTG ATGAAGATGA AGCATTGCGG CGAGGAGGAA
GCCTACACGC TGATGCGACG CCAGGCCATG AGCCGCCAGC AGAAGCTGAT CCAGGTCGCC
GAGCAGATCA TCGCCATGCA CGACATGCTC GGCGGCTGA
 
Protein sequence
MLRILLIDDT PKKVGRLRAA LLESGFEVVD ESGLTIDLPA RVEALRPDVI LIDTESPGRD 
VMEQVCLVSR DQPRPIVMFT DEHDPGVMRR AIQSGVSAYI VEGIQASRLQ PILDVAMARF
ESDQALRAQL QAREAQLAER KRIELAKGLL MKMKHCGEEE AYTLMRRQAM SRQQKLIQVA
EQIIAMHDML GG