Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_41260 |
Symbol | |
ID | 4383081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3682244 |
End bp | 3682951 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639325876 |
Product | putative two-component response regulator |
Protein accession | YP_791444 |
Protein GI | 116049749 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.923976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTGCC CTACCCTCAG CAAGGTATTG CTCGTCGAAG ACGACCAGAA GCTCGCCCGC CTGATTGCCA GCTTCCTTTC CCAGCATGGT TTCGAAGTGC GCCAGGTGCA TCGCGGTGAT GCCGCGTTCG CCGCTTTCCT CGACTTCAAG CCGCAAGTGG TGGTTCTCGA CCTCATGCTC CCCGGACAGA ATGGTCTGCA GGTGTGCCGG GAGATCCGCC GGGTCGCGAA CCTGCCGATC CTCATACTCA CCGCCCAGGA GGACGATCTT GATCACATCC TCGGCCTGGA GTCCGGCGCC GACGACTACG TGATCAAGCC GATCGAGCCA CCGGTGCTGC TCGCCCGCCT GCGCGCCCTG ATGCGCCGGC ACGCGCCCCT TCCCGCCTCC CCGGAAAGCC TGACATTCGG CAAGCTGAAC ATCGACCGAC GGCGGCGCGA AGCTGAACTC GAAGGCCGCG GCATAGAACT GACCACGATG GAGTTCGAGC TGCTCTGGCT GCTGGCCAAC CAGGCAGGGG AAATACTTTC CCGCGACGAG ATCCTCAACC AGATCCGCGG CATCGGCTTC GACGGCCTGA ACCGCAGCGT CGACGTCTGC ATCAGCAAGC TGCGCAATAA ACTGAAGGAC AATCCGCGCG AGCCGGTCCG GATCAAGACC GTCTGGGGCA AGGGCTACCT GTTCAACCCG CTGGGCTGGG AACTCTGA
|
Protein sequence | MDCPTLSKVL LVEDDQKLAR LIASFLSQHG FEVRQVHRGD AAFAAFLDFK PQVVVLDLML PGQNGLQVCR EIRRVANLPI LILTAQEDDL DHILGLESGA DDYVIKPIEP PVLLARLRAL MRRHAPLPAS PESLTFGKLN IDRRRREAEL EGRGIELTTM EFELLWLLAN QAGEILSRDE ILNQIRGIGF DGLNRSVDVC ISKLRNKLKD NPREPVRIKT VWGKGYLFNP LGWEL
|
| |