Gene PA14_41260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_41260 
Symbol 
ID4383081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3682244 
End bp3682951 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID639325876 
Productputative two-component response regulator 
Protein accessionYP_791444 
Protein GI116049749 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.923976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGCC CTACCCTCAG CAAGGTATTG CTCGTCGAAG ACGACCAGAA GCTCGCCCGC 
CTGATTGCCA GCTTCCTTTC CCAGCATGGT TTCGAAGTGC GCCAGGTGCA TCGCGGTGAT
GCCGCGTTCG CCGCTTTCCT CGACTTCAAG CCGCAAGTGG TGGTTCTCGA CCTCATGCTC
CCCGGACAGA ATGGTCTGCA GGTGTGCCGG GAGATCCGCC GGGTCGCGAA CCTGCCGATC
CTCATACTCA CCGCCCAGGA GGACGATCTT GATCACATCC TCGGCCTGGA GTCCGGCGCC
GACGACTACG TGATCAAGCC GATCGAGCCA CCGGTGCTGC TCGCCCGCCT GCGCGCCCTG
ATGCGCCGGC ACGCGCCCCT TCCCGCCTCC CCGGAAAGCC TGACATTCGG CAAGCTGAAC
ATCGACCGAC GGCGGCGCGA AGCTGAACTC GAAGGCCGCG GCATAGAACT GACCACGATG
GAGTTCGAGC TGCTCTGGCT GCTGGCCAAC CAGGCAGGGG AAATACTTTC CCGCGACGAG
ATCCTCAACC AGATCCGCGG CATCGGCTTC GACGGCCTGA ACCGCAGCGT CGACGTCTGC
ATCAGCAAGC TGCGCAATAA ACTGAAGGAC AATCCGCGCG AGCCGGTCCG GATCAAGACC
GTCTGGGGCA AGGGCTACCT GTTCAACCCG CTGGGCTGGG AACTCTGA
 
Protein sequence
MDCPTLSKVL LVEDDQKLAR LIASFLSQHG FEVRQVHRGD AAFAAFLDFK PQVVVLDLML 
PGQNGLQVCR EIRRVANLPI LILTAQEDDL DHILGLESGA DDYVIKPIEP PVLLARLRAL
MRRHAPLPAS PESLTFGKLN IDRRRREAEL EGRGIELTTM EFELLWLLAN QAGEILSRDE
ILNQIRGIGF DGLNRSVDVC ISKLRNKLKD NPREPVRIKT VWGKGYLFNP LGWEL