Gene PA14_40830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40830 
Symbol 
ID4380253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3642173 
End bp3643165 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID639325841 
Productputative oxidoreductase 
Protein accessionYP_791410 
Protein GI116049783 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTAT TCAAGGCGTT GTGGGTGACG GAAGCGCCCC ACGGCGTTTA CGAAACGCAG 
GTGGTCGAGC GCGATACCGG CGACCTGCCG GCGGGCGACG TACTGATCCG CGTGCAGTAT
TCCTCGCTGA ACTACAAGGA TGCGCTGTCC GCCAGCGGCA ACCGCGGGGT GACCCGCAAG
TACCCGCATA CCCCCGGCAT CGATGCCGCC GGTGTGGTCG CCGAGTCCTC GGTGGCCGAG
TTCGCGGCCG GTGACGAGGT GATCGTCACC GGCTACGACC TGGGCATGAA CACCGCCGGC
GGTTTCGGCC AGTACATCCG CGTGCCCGCG GCCTGGGTGA TCAAGCGCCC GCAAGGCCTG
AGCCTGCGCG AGGCGATGAT CCTCGGCACC GCCGGCCTGA CCGCGGCGCT CTGCGTCGAA
AAGCTGGAGC GCAGCGGCCT GCGCCCCGAC CATGGCTCGG TGCTGGTCAC CGGCGCCAGC
GGCGGGGTCG GCAGTATCGC CGTGGAACTG CTGGCCAAGC TCGGCTACAC CGTGGCGGCC
GCCACCGGCA AGCTGGAGCA GGCCGAGTTC CTCAACCGCC TGGGGGCCAA GCAGATCCTC
GATCGCGCCA CCGTGGCCGA TGGCGTCGAC AAGCCGTTGC TCAAGGAACA GTGGGCCGGC
GCGGTGGACA CCGTCGGCGG CGACATCCTC TTCAACGTGG TCAAGTCGTT GCAGTACGGC
GGCAGCGTCG CCTGCTGCGG CCTGACCGCC GGCGCCGGCT TCAAGGCCTC GGTGCTGCCG
TTCATCCTGC GCGGGGTCAA CCTGCTCGGG GTGGACTCGG TGGAGCTGCC GCTGGTGGTC
AAGGCATCCA TGTGGGACAA GCTGTCGCTG CAATGGAAGC TCGACAACCT CGAAGAGGTG
GCGCGCGAGA TCGCCCTCGA AGAGCTGCCG GGGGCGATCA ACCAGATCCT CGCCGGCAAG
CTGGTCGGCC GGGTGCTGGT CAACCTCGGC TGA
 
Protein sequence
MAVFKALWVT EAPHGVYETQ VVERDTGDLP AGDVLIRVQY SSLNYKDALS ASGNRGVTRK 
YPHTPGIDAA GVVAESSVAE FAAGDEVIVT GYDLGMNTAG GFGQYIRVPA AWVIKRPQGL
SLREAMILGT AGLTAALCVE KLERSGLRPD HGSVLVTGAS GGVGSIAVEL LAKLGYTVAA
ATGKLEQAEF LNRLGAKQIL DRATVADGVD KPLLKEQWAG AVDTVGGDIL FNVVKSLQYG
GSVACCGLTA GAGFKASVLP FILRGVNLLG VDSVELPLVV KASMWDKLSL QWKLDNLEEV
AREIALEELP GAINQILAGK LVGRVLVNLG