Gene PA14_40790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40790 
Symbol 
ID4380256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3640075 
End bp3640656 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content68% 
IMG OID639325838 
Productputative transcriptional regulator 
Protein accessionYP_791407 
Protein GI116049786 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGTT CTTCCCGCAA AGACGAGATT CTCCAGGCCG CCCTGGCCTG CTTCAGCGAG 
CATGGCGTAG ACGCCACCAC CATCGAGATG ATCCGCGACC GTTCCGGAGC GAGCATCGGT
AGCCTCTACC ACCATTTCGG CAACAAGGAA CGCATCCATG GCGAACTGTA CCTGGCCGGG
ATCGGCCAGT ACGCGGCGTT GCTCGAAGCC GGCTTCGCCA GGGCGCGCAG CGCCGAGGAA
ACGGTCAGGT TGCTGGTCAC CAGCTATATC GACTGGGTCG TGGCGAATCC TGACTGGGCA
CGCTTCATCC TGCACAGCCG CGGGCGGGTA GAGGCGGGGG AGTTGGGCGA GCGCCTGCGG
GCCGACAACC AGGCCCACTT CGCGCGGATC CATGCGGCGC TGGCGGGATA TCGGGCCGAG
GGCCTGTTCC GCGAGATGCC GGACGACTGC TTTGCTTCGG TGGTGATCGG CCCGGCCCAC
GACCTTGCCC GCCAGTGGCT GGCCGGGCGA ACCCGGGTGG CGTTGGCCGA CTGTCGCGAA
CTGCTGGCGC AGGTGGCCTG GGACAGCGTG CGCGCGGCCT GA
 
Protein sequence
MGRSSRKDEI LQAALACFSE HGVDATTIEM IRDRSGASIG SLYHHFGNKE RIHGELYLAG 
IGQYAALLEA GFARARSAEE TVRLLVTSYI DWVVANPDWA RFILHSRGRV EAGELGERLR
ADNQAHFARI HAALAGYRAE GLFREMPDDC FASVVIGPAH DLARQWLAGR TRVALADCRE
LLAQVAWDSV RAA