Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40620 |
Symbol | |
ID | 4380270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3625200 |
End bp | 3626369 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325824 |
Product | putative MFS transporter |
Protein accession | YP_791393 |
Protein GI | 116049800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTAC GCAACCCGAC CCTGCTCCTG CTGTTCTGCG GCCAGGCCCT GTACTGGTCC TGTTCGCTGA TCGGCATAAC ACTGACCTCG CTGGTCGGCG TCCAGCTGGC GCCGTTGAAC AGCCTGGCCA CCCTGCCCCT GGCCCTGCTG GTGCTGGGCA ACCTGCTGGC GGTGCAGCCG TTGTCGCACT TCATGCAGCG CCACGGCCGA CGTCCCGGGC TGATGCTCGG CGCCGGCGGC GGCGTGCTCG GCGGTCTGGT CTGCGCCGCC GGTGTCTGGA CTGGCGATTT CCTCTGGTTC TGTCTCGGCG CGCTGGGCAT CGGGGTCTAC CAGGCCTCGG CCATGTACTA CCGGTTCGCC GCGCTGGAGG CGGTGGATGC CGGGCGGAAA GGCCGCGCCA GCGCCTACGT GCTCGCCGGC GGGGTACTCG CCGCGCTGCT GGCGCCGAGC CTGGCGCTGT GGTCGCGCAA CGCGCTGGCC CAGCCCTTCG TCGGCGCCTA TCTGCTGATC GCCGTGCTGG CCCTCGCCGG CCTGCTGCTG ATGGCCCTGC TCCGCGAAGG CCAGGCGCCG CGCCCGGCAC GACTCGCCTG GCGCGACATA GGCGGCCTGT TGCGGCGGCC GGTGGTCCGC GCGGCCATCG CCTGCACCGC GGCGGGACAC GGGTTGATGA TCCTGATCAT GAACGCCACG CCGCTGGCCA TGAGCTTCTG CGGCCTGCCG CTGGAACAGT CGAGTCGGGT CATCCAGTGG CACGTGCTGG GAATGTTCCT TCCGGCGTTC TTCGCCGGAG CGCTGGTCGA CCGCATCGGC AACCGTCGCG TCGCCCTGCT CGGCGCGTTC CTGCTCGCCG CAAGTGCCGG CATCGCCCTG GGTGGACAGT CGGTCATGCA TTTTCTGCTC AGTTCGCTGG CCCTGGGCAG CGGCTGGAAC CTGATGCTCA TCGCCGGCAC CACCCTGCTC GGCGAGGGCC ACGCCGAAAG CGAGCGCGGC GCCGCGCAAG GATTGATGGA GCAAGGCAAC AGCCTGGTGG CGGCGCTGAT GTCGTTCGGC TCCGGCGCCC TGATCACCAG CCTTGGCTGG AACGCGGTTA ACCTGCTGGT CTGGCCGGCG CTGCTGGTGG CGCTGGCACT GCTCTGGCCG GTACGGCGAA CGCGGACGCT GTCGCGCTGA
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Protein sequence | MLLRNPTLLL LFCGQALYWS CSLIGITLTS LVGVQLAPLN SLATLPLALL VLGNLLAVQP LSHFMQRHGR RPGLMLGAGG GVLGGLVCAA GVWTGDFLWF CLGALGIGVY QASAMYYRFA ALEAVDAGRK GRASAYVLAG GVLAALLAPS LALWSRNALA QPFVGAYLLI AVLALAGLLL MALLREGQAP RPARLAWRDI GGLLRRPVVR AAIACTAAGH GLMILIMNAT PLAMSFCGLP LEQSSRVIQW HVLGMFLPAF FAGALVDRIG NRRVALLGAF LLAASAGIAL GGQSVMHFLL SSLALGSGWN LMLIAGTTLL GEGHAESERG AAQGLMEQGN SLVAALMSFG SGALITSLGW NAVNLLVWPA LLVALALLWP VRRTRTLSR
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