Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40570 |
Symbol | |
ID | 4385881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3622472 |
End bp | 3623677 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325821 |
Product | putative two-component response regulator |
Protein accession | YP_791390 |
Protein GI | 116049803 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.916032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCAC GCGACGGCCT GGTACAGGCT GGTCTGCCGG ATAATCCGTA TGCGCGCCAG TTGCGCAACG GTTTTCGTTG GTTGCGGTTC GAAAAGGAGC TGGAAAACGA GTTTCGCGAG TTTCTCAGTT GGAACTCGCT GATGCAGCGG CGTGCTGCCA TCGGGGTAGC GTTCCTGATC TGGACGCTGT TCATCGTGGC CGACTGGTTG ATGGTGGACA TCCGCCTGCA TCCCAACCTG TTCGAGCAAC TGCTGGGCGT GCGCCTGGGA ATGATCGGCC TGCTGCTGGT GGTCTGGCCG GCGGCCTTCC TGCCCAGCCT GCGCAAGGTC GGCGATGCCA TCGCGCCCTA CTGCCTGCTG CTGATCAACC TGGCGGTGCT GGCCTGCGAC GTGCTGTTCG AGTGGCATGG GGTGCCGCGC TTCACCCAAC TGGGCGCGAC CCTGGGCATC CTCGCGGTGT TCTTCCCACT CGGCCTGGCG TTCTGGGCCT GCGTGCGCCT GGCGTTGCTG TGCCTGGCCC TGAACCTGGC GGTATTCCTG CTCTTCGGCG GCGAAGAGAA CCTGCGCACC AACCTGCTGA ATACGCTCTA CAACGGCCTG GTGGTGCTGA TCTGTTCGTT CGCCCTGTAC CTGCAGGACT ACGCCCAGCG CGAGCAGTTC CTCGGCCGGC GGCTGCTGGG CATGATGGCC GAACAGGACA GCCTCACCGG CCTGGTCAAC CGACGCTACT ACGAGCTGCT CGCCCAGCGG GCCCTGGAGC AGGGCGCCCG CGAAGAAAAG GGGGTGGCGC TGATCCTGGT GGATGTCGAC GACTTCAAGG CCTACAACGA CCACTACGGG CATCCGGCCG GCGATGCCGC CCTGCGCCAG CTTGGCGTCG TGCTCCGGCA GGGCGCGCGG CGGCCGTTGG ATATCGCCGC GCGCCTGGGC GGGGAGGAGT TCGCCGTGTT GCTCTACGAC AGCGAGGAGG GCAACACCCT GGCCATCGCC GAGCGCCTGC GGCAGGCGGT GGAGGCGCTG GGCATCGAGC ACCTGGGCTC CAGCGCCGGC CCCTGCCTGA CCATCAGCCT GGGGGTGGCC TATTCGACCT CCGGCATGGG CCTGGACGCG CTCTATCGCG AGGCCGATCG CGCGCTCTAC GAGGCCAAGG ATGCAGGGCG CAACGCGGTG CGCGTGGCGT TCCGTCAGCA CGACCGCCTC GAATAG
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Protein sequence | MLARDGLVQA GLPDNPYARQ LRNGFRWLRF EKELENEFRE FLSWNSLMQR RAAIGVAFLI WTLFIVADWL MVDIRLHPNL FEQLLGVRLG MIGLLLVVWP AAFLPSLRKV GDAIAPYCLL LINLAVLACD VLFEWHGVPR FTQLGATLGI LAVFFPLGLA FWACVRLALL CLALNLAVFL LFGGEENLRT NLLNTLYNGL VVLICSFALY LQDYAQREQF LGRRLLGMMA EQDSLTGLVN RRYYELLAQR ALEQGAREEK GVALILVDVD DFKAYNDHYG HPAGDAALRQ LGVVLRQGAR RPLDIAARLG GEEFAVLLYD SEEGNTLAIA ERLRQAVEAL GIEHLGSSAG PCLTISLGVA YSTSGMGLDA LYREADRALY EAKDAGRNAV RVAFRQHDRL E
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