Gene PA14_39990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39990 
Symbol 
ID4385617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3563689 
End bp3564456 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID639325773 
Producthypothetical protein 
Protein accessionYP_791342 
Protein GI116049851 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATT ACTTGATCGG AGTGGCGCTA TTCATCTTCA TGCTGGAACA GTTGGTTCCC 
GGCTGGAAAT TGCCCAAGGT GAGCACCTGG GTGGCCCGGG TGATCTTCCT CAACATCGTC
CAGGTGTCGA TCGCCCTGCT CGCCGGCATC ACCTGGAACA AATGGATGAT GGGGCACAGC
CTGCTGCACA CCTCGGATGC CCTGCCACCA CTGCTGGCCG GCTTCGCCGC CTACTTCGTC
AACACCTTCG TCACCTACTG GTGGCATCGC GCGCGCCACG CCAACGACAC GCTCTGGCGG
CTGTTCCACC AGTTGCACCA CGCGCCGCAA CGCATCGAGG TATTCACCTC CTTCTACAAG
CATCCGACCG AGATGGTCTT CAACTCGCTG CTGGGCAGCT TCGTCGCCTA CGTGGTGATG
GGCATCAGCA TCGAGGCCGG CGCCTACTAC ATCATGTTCG CCGCGCTCGG CGAGATGTTC
TACCACTCGA ACCTGCGCAC CCCGCACGTC CTCGGCTACC TGTTCCAGCG CCCGGAGATG
CACCGCATCC ACCACCAGCG CGACCGCCAC GAGTGCAACT ACAGCGACTT CCCGATCTGG
GACATGTTGT TCGGCACCTA CGAGAACCCC CGCCGCATCG ACGAGCCGCA GGGCTTCGCC
GGCGACAAGG AGCAGCAGTT CGTCGACATG CTGCTGTTCC GCGACGTGCA CAGCCTCCCC
GGAAAAACCC AGCCCGCTCC CGTCCTGGTC AAGCCCGACG TCAGGTGA
 
Protein sequence
MIYYLIGVAL FIFMLEQLVP GWKLPKVSTW VARVIFLNIV QVSIALLAGI TWNKWMMGHS 
LLHTSDALPP LLAGFAAYFV NTFVTYWWHR ARHANDTLWR LFHQLHHAPQ RIEVFTSFYK
HPTEMVFNSL LGSFVAYVVM GISIEAGAYY IMFAALGEMF YHSNLRTPHV LGYLFQRPEM
HRIHHQRDRH ECNYSDFPIW DMLFGTYENP RRIDEPQGFA GDKEQQFVDM LLFRDVHSLP
GKTQPAPVLV KPDVR