Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38740 |
Symbol | |
ID | 4380277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3454285 |
End bp | 3456069 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325678 |
Product | putative two-component sensor |
Protein accession | YP_791247 |
Protein GI | 116049943 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.924619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGGC CCTCTGAGCA GCAGCAGGAG GCCCTGGCCG GGTTGCTCGG CCTGGGCAGC CACTCCGCGC GCAAGAGCCA CTACCCGGAG CTGCTGGCGC GCCTGGAGGA GCTGGAGGCC GAGCGCAACC GCTACAAATG GCTGTTCGAG CACGCGGTGC ACGGCATCTT CCAGGCCAGC CTCGGCCAGG GGCTGCGCGC CGCCAATCCG GCGCTGGCGC AGATGCTCGG CTACGACGAT CCGCAACAGG TGCTCTGGTC GCTGGAGGAC ATGGCCGGGC AACTGTTCGT CGGCGGCGAG GCCGAGATGC GACGGATCCG CGCGCTGCTG CGCGAGCGCG GCGGCCTGTT CGGCTACGAG ACGCGCCTCT GGCGCAGGGA CGGCAGTCAC ATCGAGGTAT TGATGAACCT GCTGCTCAGG CACGACGAGG AAGAATTGGT CGAAGGTTTT GTCGCCGACA TCACCGAGCG GGTCCAGGCC CAGCAGCGCC TGCAGACCAT GAACGAGGAG CTGGAGCGGC GGGTAGCCGA GCGCACCCAC GAGCTGGAAG AGCTCAACCG CCAGTTGCGC CAGGCGCGCG ACGCCGCCGA AGCCGCCAAC CACAGCAAGG ACAAGTACCT CGCCGCCGCC AGCCACGACC TGCTGCAACC GCTCAACGCG GCGCGGCTGC TGGTCGACAC CCTGCGTGAG CGGGGCCTGC CGGCCGCCGA ACTGCAACTG GTGGAGCGCA CCCACCTGGC CCTGGAAGGC GCCGAGACCT TGCTCACCGA CCTGCTGGAA ATCGCCCGGC TCGACCAGAG CGCGATCCGT CCGGACCTGG ACGACTATTC CCTCGACGAA CTGCTCGCTC CGCTGGCCTC GGAGTTCGAG GAAGTCGCGC GTGCCGCCGG CCTGGCCCTG CGTGCGCGGA TCCCACGACT GGCAGTGCGC ACCGACGCGC GCCTGCTGTC GCGGATCCTG CGCAACTTGC TCAGCAACGC CTGCCGCTAC ACCGAGCGCG GCAGCGTGCT GCTGGGCGCG CGCCGGCGTG GCGGCAAGGT ACGCCTGGAG GTATGGGACA CTGGCCGGGG CATCCCCGCC GACCAGTTGC AGGCGATCTT CCTCGAGTTC AACCAACTGG ACGCCGGGCG CGCTTCCGAG CGCCGTGGCG TCGGGCTCGG GTTGGCCATC GTCGACCGTA TCGCCGGCAT CCTCGGCTAC CGCATCGAGG TGCATTCGAC TCCCGGCCGA GGCTCGCTGT TCGCCATCGA GGTGCCGCTG GTCCGCAAGC CAGCGCGGCC AGTGCCCGGC GAGGCGACTG CGCGGCTTTC GGCCGGCGAT CCGCTGCCGG GACGGCGGCT GCTGGTGGTG GACAACGAGA CCGAGATTCT CTTCAGCATG TCCGCGCTGC TCGGCCAGTG GGGCTGCGAG GTGCTTACCG CCACCGACCT GGAAGGCGCG CGCAAGGCGC TCGATGGCCG CGCGCCGGAT GCGATCCTGG TCGACTACCA CCTGGACCAC GGCGCTACCG GTTGCCAGTT GCTGGGCGCC TTGCGCGAGG ACTACGGCGC GGAGATCGCC GCGGTGATGA TCACCGCCGA CCGCAGCGAC GATTGCCGCC GCGCGCTGGC CCGCCTGGGC GTGCCGCTGC TCAACAAGCC GCTGAAGCCC GGCAAGTTGC GCGCGGCGCT AAGCGCCTTG CTCGGCGAGG CCCAGGGCGC TCCCCGCGGC GCCGGAGAAG GTGCAGGTCC TAGCCCGGCC GGCGGCTGCG TCGGTGCAGC GCAATGGCCA GGGCCAGCCC GCTGA
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Protein sequence | MARPSEQQQE ALAGLLGLGS HSARKSHYPE LLARLEELEA ERNRYKWLFE HAVHGIFQAS LGQGLRAANP ALAQMLGYDD PQQVLWSLED MAGQLFVGGE AEMRRIRALL RERGGLFGYE TRLWRRDGSH IEVLMNLLLR HDEEELVEGF VADITERVQA QQRLQTMNEE LERRVAERTH ELEELNRQLR QARDAAEAAN HSKDKYLAAA SHDLLQPLNA ARLLVDTLRE RGLPAAELQL VERTHLALEG AETLLTDLLE IARLDQSAIR PDLDDYSLDE LLAPLASEFE EVARAAGLAL RARIPRLAVR TDARLLSRIL RNLLSNACRY TERGSVLLGA RRRGGKVRLE VWDTGRGIPA DQLQAIFLEF NQLDAGRASE RRGVGLGLAI VDRIAGILGY RIEVHSTPGR GSLFAIEVPL VRKPARPVPG EATARLSAGD PLPGRRLLVV DNETEILFSM SALLGQWGCE VLTATDLEGA RKALDGRAPD AILVDYHLDH GATGCQLLGA LREDYGAEIA AVMITADRSD DCRRALARLG VPLLNKPLKP GKLRAALSAL LGEAQGAPRG AGEGAGPSPA GGCVGAAQWP GPAR
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