Gene PA14_38660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38660 
Symbol 
ID4380284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3447963 
End bp3448661 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID639325671 
Productputative CoA transferase, subunit A 
Protein accessionYP_791240 
Protein GI116049950 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC TCGACAAGCG AGTAGGCAGT TACGAAGAGG CCCTCGAAGG CCTGACCGAC 
GGCATGACCG TCCTCGCCGG GGGCTTCGGC CTCTGCGGGA TTCCCGAGAA CCTGATCGCG
GAAATCCGCC GGCGCGGGGT CAGGGACCTC ACGGTGGTCT CGAACAACTG CGGCGTCGAC
GGTTTCGGCC TCGGCGTGCT GCTGGAAGAC CGGCAGATCC GCAAGATGAT CGCCTCCTAC
GTCGGCGAGA ACGCCCTGTT CGAGCAACAA CTGCTCAGTG GCGAGCTGGA AGTCGAACTG
ACCCCGCAAG GCTCGCTGGC CGAGAAGATC CGCGCCGGCG GCGCCGGCAT CCCGGCCTTC
TTCACCGCCA CCGGCTACGG CACCCCGGTC GCCGAGGGCA AGGAGGCGCG CGAGTTCAAT
GGCCGCCACT ACATCCTCGA GCCGGCCATC ACCGGCGACT TCGCCATCGT CAAGGGCTGG
AAGGCCGACC ATTTCGGCAA CGTCGTCTAT CGCCACACCG CGCAGAACTT CAACCCGCTG
GTCGCCACCG CCGGGCGCAT CACGGTGGTC GAGGTGGAGG AGATCGTCGA GCCCGGCGAA
CTGGACCCGA CGCAAATCCA CACCCCCGGC ATCTACGTCG ACCGGATCAT CCAGGGTCGC
TTCGAGAAAC GCATCGAGAA ACGCACGCTG CGCGCCTGA
 
Protein sequence
MSGLDKRVGS YEEALEGLTD GMTVLAGGFG LCGIPENLIA EIRRRGVRDL TVVSNNCGVD 
GFGLGVLLED RQIRKMIASY VGENALFEQQ LLSGELEVEL TPQGSLAEKI RAGGAGIPAF
FTATGYGTPV AEGKEAREFN GRHYILEPAI TGDFAIVKGW KADHFGNVVY RHTAQNFNPL
VATAGRITVV EVEEIVEPGE LDPTQIHTPG IYVDRIIQGR FEKRIEKRTL RA