Gene PA14_38470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38470 
SymbolgnyH 
ID4380298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3430753 
End bp3431550 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID639325657 
Productgamma-carboxygeranoyl-CoA hydratase 
Protein accessionYP_791226 
Protein GI116049964 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TCCAGACCAT CCAGCTTGAG ATCGACCCGC GCGGCGTAGC CACCCTGTGG 
CTGGACCGGG CGGAAAAGAA CAACGCCTTC AATGCCGTCG TGATCGACGA ACTGTTGCAG
GCCATCGATC GCGTCGGCAG CGACCCGCAG GTCCGCCTGC TGGTGCTGCG CGGCCGTGGC
CGGCACTTCT GCGGCGGTGC CGACCTGGCC TGGATGCAGC AGTCGGTGGA CCTCGACTAC
CAGGGCAACC TGGCCGACGC CCAGCGCATC GCCGAACTCA TGACCCATCT CTACAACCTG
CCCAAGCCGA CCCTGGCGGT GGTCCAGGGC GCGGTGTTCG GCGGCGGGGT CGGCCTGGTC
AGTTGCTGCG ATATGGCCAT CGGCAGCGAC GACGCGACCT TCTGCCTGTC CGAGGTACGC
ATCGGCCTGA TCCCGGCGAC CATCGCCCCG TTCGTGGTCA AGGCCATCGG CCAGCGCGCC
GCGCGACGCT ATTCGCTGAC CGCCGAGCGC TTCGACGGAC GCCGCGCCAG CGAACTGGGC
CTGCTCAGCG AAAGCTGTCC CGCCGCCGAA CTGGAAAGCC AGGCCGAGGC CTGGATCGCC
AACCTGCTGC AAAACAGCCC GCGCGCCCTG GTCGCCTGCA AGGCGCTCTA CCATGAGGTC
GAGGCCGCCG AGCTGAGCCC GGCGCTGCGC CGCTACACCG AGGCGGCCAT CGCCCGCATC
CGCATCAGCC CGGAAGGCCA GGAAGGCCTG CGCGCCTTCC TGGAGAAACG CACGCCCGCC
TGGAGAAACG ACGCATGA
 
Protein sequence
MSEFQTIQLE IDPRGVATLW LDRAEKNNAF NAVVIDELLQ AIDRVGSDPQ VRLLVLRGRG 
RHFCGGADLA WMQQSVDLDY QGNLADAQRI AELMTHLYNL PKPTLAVVQG AVFGGGVGLV
SCCDMAIGSD DATFCLSEVR IGLIPATIAP FVVKAIGQRA ARRYSLTAER FDGRRASELG
LLSESCPAAE LESQAEAWIA NLLQNSPRAL VACKALYHEV EAAELSPALR RYTEAAIARI
RISPEGQEGL RAFLEKRTPA WRNDA