Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38470 |
Symbol | gnyH |
ID | 4380298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3430753 |
End bp | 3431550 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325657 |
Product | gamma-carboxygeranoyl-CoA hydratase |
Protein accession | YP_791226 |
Protein GI | 116049964 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAT TCCAGACCAT CCAGCTTGAG ATCGACCCGC GCGGCGTAGC CACCCTGTGG CTGGACCGGG CGGAAAAGAA CAACGCCTTC AATGCCGTCG TGATCGACGA ACTGTTGCAG GCCATCGATC GCGTCGGCAG CGACCCGCAG GTCCGCCTGC TGGTGCTGCG CGGCCGTGGC CGGCACTTCT GCGGCGGTGC CGACCTGGCC TGGATGCAGC AGTCGGTGGA CCTCGACTAC CAGGGCAACC TGGCCGACGC CCAGCGCATC GCCGAACTCA TGACCCATCT CTACAACCTG CCCAAGCCGA CCCTGGCGGT GGTCCAGGGC GCGGTGTTCG GCGGCGGGGT CGGCCTGGTC AGTTGCTGCG ATATGGCCAT CGGCAGCGAC GACGCGACCT TCTGCCTGTC CGAGGTACGC ATCGGCCTGA TCCCGGCGAC CATCGCCCCG TTCGTGGTCA AGGCCATCGG CCAGCGCGCC GCGCGACGCT ATTCGCTGAC CGCCGAGCGC TTCGACGGAC GCCGCGCCAG CGAACTGGGC CTGCTCAGCG AAAGCTGTCC CGCCGCCGAA CTGGAAAGCC AGGCCGAGGC CTGGATCGCC AACCTGCTGC AAAACAGCCC GCGCGCCCTG GTCGCCTGCA AGGCGCTCTA CCATGAGGTC GAGGCCGCCG AGCTGAGCCC GGCGCTGCGC CGCTACACCG AGGCGGCCAT CGCCCGCATC CGCATCAGCC CGGAAGGCCA GGAAGGCCTG CGCGCCTTCC TGGAGAAACG CACGCCCGCC TGGAGAAACG ACGCATGA
|
Protein sequence | MSEFQTIQLE IDPRGVATLW LDRAEKNNAF NAVVIDELLQ AIDRVGSDPQ VRLLVLRGRG RHFCGGADLA WMQQSVDLDY QGNLADAQRI AELMTHLYNL PKPTLAVVQG AVFGGGVGLV SCCDMAIGSD DATFCLSEVR IGLIPATIAP FVVKAIGQRA ARRYSLTAER FDGRRASELG LLSESCPAAE LESQAEAWIA NLLQNSPRAL VACKALYHEV EAAELSPALR RYTEAAIARI RISPEGQEGL RAFLEKRTPA WRNDA
|
| |