| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38220 |
|---|
| Symbol | |
|---|
| ID | 4385866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3410395 |
|---|
| End bp | 3411303 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639325637 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791206 |
|---|
| Protein GI | 116049983 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2375] Siderophore-interacting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.00068918 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC CCGCCTATCG TCTGTTCAAT GTCGAACTCA AGCGCCGCGA GCAACTCAGC
CCGGCGCTGA CCCGCTTCGT CTTCGGCGGC CCGGAGGTCG CCGAGATGAA GACCCTGGCC
GCCGACCAGC GGATCAAGAT CTTCTTCCCC GATGCCAGCG GCCAGCCGCC CAGCCTGCCC
GGTGGCAGCG AGTGGTACCA GGCCTATCGC AGCGTCGAGC CGGCTCGCCG GCCGCCGATG
CGTACCTACA CCATCCGTGC GCTGCGCGCC GAGCAGGAGG AGGTCGACGT GGAGTTCGTC
CTCCACGGCG AGAACGGCCC GGCCTCGGCC TGGGCGACCC ACGCGCGGAT CGGCGACCGC
CTGCAACTGG CCGCGCCCAA CCGGCAATAC GGCGATGACC CCGGCGGCTA CGAATGGAAG
CCGCCGGCTG GCGTCCGCCA TATCCTGCTG ATCGCCGACG AAACCGCCTT GCCCGCGGTG
GCGGGAATTC TCGAGGAGCT GGCCGGCGAA GCCGAGCCGC CGGTGGTCGA GGCCTTTCTC
GAAGTGCCGG GAGAAGCCGA TATCCTCGAC CTGCCGGCGA TTCCCGGTGC GCGCCTGCAC
TGGCTGCCGC GCCACCAGGC CGGCATCCAT TCGCGCAACG GCGAGCGGAT GATCGAGGCG
GCGCGCCAGG CGCGGCTGCC GGAGCGCGAG GTGGCGGGTG GTGCGGCCCA GGAGCTGGAG
GACATCGATA TCGACGAGGA GATCCTCTGG GAACTGGCGA GCCCCGAGAG CGGCAGTTTC
TACGCCTGGG TCGCCGGCGA GTCGGCGGCG GTGATGGCGA TCCGGCGCTA CCTGGTGCAG
GAGCGCGGTA TCGACAAGCG TCATCTGACC CTGATGGGCT ATTGGCGCCT GGGCAAGGTG
TTCGACTGA
|
|---|
| Protein sequence | MSQPAYRLFN VELKRREQLS PALTRFVFGG PEVAEMKTLA ADQRIKIFFP DASGQPPSLP
GGSEWYQAYR SVEPARRPPM RTYTIRALRA EQEEVDVEFV LHGENGPASA WATHARIGDR
LQLAAPNRQY GDDPGGYEWK PPAGVRHILL IADETALPAV AGILEELAGE AEPPVVEAFL
EVPGEADILD LPAIPGARLH WLPRHQAGIH SRNGERMIEA ARQARLPERE VAGGAAQELE
DIDIDEEILW ELASPESGSF YAWVAGESAA VMAIRRYLVQ ERGIDKRHLT LMGYWRLGKV
FD
|
|---|
| |