Gene PA14_36200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_36200 
Symbol 
ID4380335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3225300 
End bp3226106 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID639325477 
Productputative binding protein component of ABC transporter 
Protein accessionYP_791046 
Protein GI116050137 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00134748 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAAC TCCCCGCCAT CACCGCCCTC GCCCTCGCCC TGATCTCCGG CCTGGCCCAG 
GCCGACCGCC TGGAGGACAT CCGCAAGGCC GGCGTATTGC GCGTCGCGTC CTTCGACAGC
AACCCGCCGT TCGGCTTCGT CGACGCCAAG AGCAAGCAGA TCGAAGGCCT CGACGTCGAC
TATGCCAAGG CCCTGGCCGA CAAGCTGGGC GTCCGGCTGC AAGTGCTGCC GACCAACCCG
GCCAACCGCA TCCCGCTGCT GACGGCGAAC AAGGTCGACC TGGTCCTGGC CAACTTCACC
ATCACCCGGG AGCGTGCGCA GCAGGTGGAC TTCAGCATCC CCTACTTCTC CTCCGGCCAG
CAGTTCATCG TCAAGAAAGG CACCCTGACC TCGCCGGAAG TCCTCAACAA GTGGCGGGTC
GGCGTGGACA AGGGCACGGT CAACGAAGGC GTGCTGCGCG AGAAGTTCCC CGGCGCCAAG
GTCATCGCCT ACGACGACAC GCCCTTCGCT TTCACCGCCC TGCGCAACGG CCAGGTCCAG
GCCATCACCC AGGACGGTCC GAAGCTGATC GGCCTGCTGG CCAACGTGCC CGACCGCGAC
AAGTACGAAG TGCCGCCCTT CACCATTTCC AACGACCTGA TCGGCGTCGG TATTCCCAAG
GGCGAGAAGT CCCTGACCGA GTTCGTCGAC AAGAGCCTGC GCGAGCTGGA GCAGGACGGT
CAGGCGCAGA AGATCTACGA CACCTGGTTC GGTCCGCAGA CCAAGACCCC GCTGGCGCGC
CTGTACAAGA TCGGCGACAA GAGCTGA
 
Protein sequence
MKKLPAITAL ALALISGLAQ ADRLEDIRKA GVLRVASFDS NPPFGFVDAK SKQIEGLDVD 
YAKALADKLG VRLQVLPTNP ANRIPLLTAN KVDLVLANFT ITRERAQQVD FSIPYFSSGQ
QFIVKKGTLT SPEVLNKWRV GVDKGTVNEG VLREKFPGAK VIAYDDTPFA FTALRNGQVQ
AITQDGPKLI GLLANVPDRD KYEVPPFTIS NDLIGVGIPK GEKSLTEFVD KSLRELEQDG
QAQKIYDTWF GPQTKTPLAR LYKIGDKS