Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35900 |
Symbol | |
ID | 4381395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3195183 |
End bp | 3196103 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325452 |
Product | putative dehydrogenase |
Protein accession | YP_791021 |
Protein GI | 116050162 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000183972 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 2.30641e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGTGAAC ACAATGATGA AAGCGTCGAG TTCGAAGTGT CCGTGATCGG GCTCGGAGCC ATGGGAACCA TCATGGCCCA AGCGTTGCTC AGGCAAGGCA GGCGCGTGGC GATCTGGAAC CGCTCACCCG GCAAGGCCGC GGCGCTCGTC GCCGCTGGCG CTCACCTGTG CGAGAGCGCC GAAGCCGCGC TGGCTGCAAG CCCGGCCACG ATCTTCGTGC TCCTGGACAA CCAGGCGACC CGCGAGGTGC TCGGGATGCC AGGTGTGATG CAGGCACTGG CCAACCGTAC GATCGTCGAT TACACGACCA ACGCCCAGGA CGAGGGTCTG GCGCTTCAGA GTCTCGTCAA CCGCGCGGGC GGCCATTACG TCAAAGGGAT GATCGTGGCC TACCCGCGCA ACGTTGGTCG TCGCGAAAGC CACAGCATTC ATACCGGTGA TCCTGAGGCC TTCGAACGGC ATCGGGCGCT GCTTGAGGGG CTTGCCGGTC ATACGACGTT CCTCCCCTGG GACGAAGCAT TGGCCTTCGC CACCGTGCTC CACGCGCATG CGTTTGCCGC GATGGTGGCT TTCTTCGAGG CCGTGGGGGC TGGTGTCCAC TTCGGCCTGC CGCCTTCGAA GACCGCTCGG CTCATGCTCG ACACGTCGCG CTTTTTCGTC GCCGATGCAC TCGAGGAAGC GGTCCGTCGG CTGGAAGCGC AGGATTTCGC AGGCGATCAG GCGAGGCTCG ATGTGCATGC CCAGGCCTTC GCCCATATCG CCGGAGCCCT GCACGCACAA GGGGCCTGGA CGCCGGTCTT CGACGCGCTG TGCCAGGCCG TGCAACGCGC GGCAGCCATG GGCTATGGCG ATCAGGACAT CGTAGCCGTC ACCCGCCTGT TCGCCCGCGA ATGCGACACC GCAAGCGCGG CGGGACAGTG A
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Protein sequence | MREHNDESVE FEVSVIGLGA MGTIMAQALL RQGRRVAIWN RSPGKAAALV AAGAHLCESA EAALAASPAT IFVLLDNQAT REVLGMPGVM QALANRTIVD YTTNAQDEGL ALQSLVNRAG GHYVKGMIVA YPRNVGRRES HSIHTGDPEA FERHRALLEG LAGHTTFLPW DEALAFATVL HAHAFAAMVA FFEAVGAGVH FGLPPSKTAR LMLDTSRFFV ADALEEAVRR LEAQDFAGDQ ARLDVHAQAF AHIAGALHAQ GAWTPVFDAL CQAVQRAAAM GYGDQDIVAV TRLFARECDT ASAAGQ
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