| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35430 |
|---|
| Symbol | pvcA |
|---|
| ID | 4384419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3149809 |
|---|
| End bp | 3150795 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325413 |
|---|
| Product | pyoverdine biosynthesis protein PvcA |
|---|
| Protein accession | YP_790982 |
|---|
| Protein GI | 116050201 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3207] Pyoverdine/dityrosine biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000151483 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0208888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCCA TCGCCGAAGA CACCCTTCCC GCACGCGTAT TGAAAGAACT GTTGCTCTAT
CGCCGCCGTT ACCCCGAGCA TCGCCAGAGC GCCAGCGAAG CGGACGAGGT CCGCCGCATC
GAACAGGTCC AGTTGCCGCG TATCGCCGCC TTCATCGAAG CCGGCGAGCC CATCGAGTTC
GTCCTGCCGG CGTTTCCGGC CAAGTCGCCG AACCCCGGCA AGGTCCTCGA CAGCCGTCCG
GACATGGCCG AGCGCCTGTC GCTGTCGTTC CTCAACCACC TGTGCCAGCG CATCCAGCTG
TTCTATGCAC CGGGCGCGAA GATCACCGTC TGCTCCGACG GCCGGGTGTT CGGCGACCTG
GTGAGGATCG GCGATGCGCA CATCAGCGCC TACCAGGATG CCTTGCGCCT GATGATCGAG
GAGATCGGCG CCACCCATAT CGGCGTGTTC AACCTGGAGG ACGTACGCGC CTTCGAGGCC
CAGCGCGACA ACCACGAGCA GCTCCGCCAG TTGCTGATCG ACGGCTACGC CGAGCCGCTG
GAAAGCATCC GCGAGACCCT GCTGGCCAGC GAAGAAGGCC TGCTGCTGTA CCGCGCCATC
ACCCGCTTCC TCTACGAGGA CGGCCTGACC CCCGACTACC AGGGCTCGAA GACCGCCCTG
CAACGCGACG CCAAGGAGCG CGCCTACGGG GTGATCCAGC GCAGCTGGGC CTGGGGCGCG
CTGCTGGCCG ACCAGTTCCC CCGCGCGATC CGTCTGTCCA TCCATCCGCA GCCGGCGGAC
AGCCTGAAGT TCGGCATCCA CATGATGCCG ACCCGCGACG ACTGGCTGAC GCCCTGGCAC
GGCGTGGCGG TGAACACCGA GGACCGCTTC GTGCTGATGA AGCGCAGCGA GGTGCTGGAA
CTCGGCGGCG AACTGGTGCA GATCAACGGC CAGCCCAGTC ACTACCGCCT GCCGGCCAGG
GCCGCCCGGC GCGCCGCCGT GGCCTGA
|
|---|
| Protein sequence | MYAIAEDTLP ARVLKELLLY RRRYPEHRQS ASEADEVRRI EQVQLPRIAA FIEAGEPIEF
VLPAFPAKSP NPGKVLDSRP DMAERLSLSF LNHLCQRIQL FYAPGAKITV CSDGRVFGDL
VRIGDAHISA YQDALRLMIE EIGATHIGVF NLEDVRAFEA QRDNHEQLRQ LLIDGYAEPL
ESIRETLLAS EEGLLLYRAI TRFLYEDGLT PDYQGSKTAL QRDAKERAYG VIQRSWAWGA
LLADQFPRAI RLSIHPQPAD SLKFGIHMMP TRDDWLTPWH GVAVNTEDRF VLMKRSEVLE
LGGELVQING QPSHYRLPAR AARRAAVA
|
|---|
| |